KEGG   Drosophila miranda: 117185751
Entry
117185751         CDS       T06132                                 
Name
(RefSeq) polyadenylate-binding protein-like
  KO
K13126  polyadenylate-binding protein
Organism
dmn  Drosophila miranda
Pathway
dmn03015  mRNA surveillance pathway
dmn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117185751
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117185751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmn03019]
    117185751
   03041 Spliceosome [BR:dmn03041]
    117185751
Messenger RNA biogenesis [BR:dmn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     117185751
   mRNA cycle factors
    Stress granule specific factors
     117185751
Spliceosome [BR:dmn03041]
 Complex C
  Other components
   Complex C specific factors
    117185751
SSDB
Motif
Pfam: RRM_1 PABP RRM_7
Other DBs
NCBI-GeneID: 117185751
NCBI-ProteinID: XP_033251908
Position
Y
AA seq 640 aa
MASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL
DTMNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCK
VAIDEKGNSKGYGFVHFETEEAANISIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAK
LFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAV
QALNGKDMGESKSLYVARAQKKAERQQQLTRKFEELKKKRHDSVFGVNLYVKNLDDTIDD
ERLRKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVA
LAQRKEERKAHLASQYMRHMTGMRMQQLGQMFQPNTTGGFFVPTIPPSQRFFGPQMTTQM
RNAPRWAPQVRPAATVQSLQAGAAAAAAGGFQGAAGAVTTQFRSAAAGARGAQPQQVQGT
HAAAAAAAANDMRNTGARAITGQQTAAAPNLQLAGAQIAGGAQQRAPSYKYTSNMRNPPV
QQMQQAQPMPQQLQGKNSEKLIASLLANANPQEQKQILGERLYPMIERMHAALAGKITGM
LLEIENSELLHMLEDKEALKAKVEEAVAVLQVHRVSEPAN
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggcctcactatacgtcggtgatctgcaccaggatatcaacgaagctggactttttgaa
aagttctcgactgcaggtccagttctgtccatacgcgtctgccgcgatgtgattacccgt
cgctcattgggttatgcctacgtgaatttccagcagccagccgatgctgaacgtgctctg
gacacaatgaatttcgacttgatccgcaacaaacccattcgcataatgtggtctcagcgc
gatccctccctgcgccgctcaggtgttggcaatgtgttcattaagaacctggacaagggc
attgacaacaaagccatttacgacactttctctgccttcggcaatatcctgagctgcaag
gtcgccatcgatgagaagggtaactccaagggctatggctttgtccatttcgagactgag
gaggcagcaaacatatccatcgacagggtcaacggcatgttgctcaacggcaagaaggtg
tacgtgggcaaattcattccccgcaaggagcgcgagaaggagctgggtgagaaggccaaa
ctcttcaccaacgtgtacgtgaagaacttcaccgaagattttgatgacgagaagctcaag
gaattctttgagccatacggcaagatcactagctacaaggtcatgtccaaggaagatggt
aagagcaagggcttcgggtttgtggcctacgaaactacagaggctgccgaagccgccgtt
caggctctcaacggcaaggatatgggcgagagcaagtccctgtatgtggctcgtgcacag
aaaaaggctgagcgccagcagcagctcacgcgtaagtttgaggagctgaagaagaagcgc
cacgactctgtcttcggtgtcaacttgtatgtcaagaacttggacgacacaattgatgac
gagcgtctgcgcaaggatttctccatgtatggaacaattacctcggccaaggtcatgacc
gacgaagagggccgctccaagggcttcgggttcgtctgcttcatttcacccaatgaggcc
acatgcgccgtgacagaactgaatggccgcgtcatcggcagcaagcctctgtacgtggcc
ctggcccagaggaaggaggagcgcaaggctcacctcgcatcgcagtacatgcgccacatg
accggtatgcggatgcagcagcttggacagatgttccagcccaacaccactggcgggttc
tttgttccgaccatacctccgagccagcgcttcttcggtccccagatgaccacccaaatg
cgtaacgcccctcgctgggctcctcaggtgcgtccagctgccaccgtgcagagcttgcag
gccggcgctgccgccgccgctgctggaggcttccagggtgcagccggagcggtgaccaca
cagttccgttcggctgcagccggtgcacgtggtgcccagccacaacaggtgcagggcacg
catgccgccgctgctgccgcggctgcaaacgacatgcgcaacactggagccagagccatc
accggccagcagacagcagctgcccccaacttgcaactcgctggtgcccagatcgctggc
ggtgcccagcagcgtgctcccagctacaagtacacatcgaacatgcgcaatccccctgtg
cagcagatgcagcaggcgcagcccatgccgcagcagttgcagggcaagaactctgagaag
ctcattgcctcattgttggctaatgccaatccccaggagcagaaacagatcctgggcgag
cgtctgtacccgatgattgagcgcatgcacgcagccctggccggaaagatcactggcatg
ttgctggagattgagaactctgagctattgcacatgttggaggataaggaggccctcaag
gccaaggtggaggaagccgtggccgtgctccaggtgcatcgcgttagcgagcccgccaac
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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