KEGG   Deinococcus maricopensis: Deima_1950
Entry
Deima_1950        CDS       T01412                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
dmr  Deinococcus maricopensis
Pathway
dmr03030  DNA replication
dmr03410  Base excision repair
dmr03420  Nucleotide excision repair
dmr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dmr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Deima_1950
   03410 Base excision repair
    Deima_1950
   03420 Nucleotide excision repair
    Deima_1950
   03430 Mismatch repair
    Deima_1950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dmr03032]
    Deima_1950
   03400 DNA repair and recombination proteins [BR:dmr03400]
    Deima_1950
Enzymes [BR:dmr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Deima_1950
DNA replication proteins [BR:dmr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Deima_1950
DNA repair and recombination proteins [BR:dmr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Deima_1950
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Deima_1950
   MMR (mismatch excision repair)
    DNA ligase
     Deima_1950
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Deima_1950
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_5 HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH 5_3_exonuc BRCT_2 Auto_anti-p27
Other DBs
NCBI-ProteinID: ADV67595
UniProt: E8U956
Position
complement(2103984..2105999)
AA seq 671 aa
MTEARYRELIQTIQHHNRLYYEQDTPEISDAEYDALMRELRAAEAAHPEWITPESPTQKV
GGAPSSAFQPVTHPTPMTSLDNVFNDEELTDWGAKLARALGAAPDTADYAYTCELKIDGL
SVNLYYVDGVLQWAATRGNGVVGEIVTEQVLTIPEIPRTLPGLKGELEVRGEVYLSREEF
ASYNALAEELGLPLLKNPRNGAAGALRQKDPKETAKRRLRAILYALGKRDGVPARTQWDV
LTWLAEQGFPTSAYSERVQGLPAAAAYHARMVADRANLPFDADGTVIKLDDLRAQEDAGF
TSRAPRWAIAYKFPVEEVQTKLLSITINVGRTGKLAPLAHLEPRLIEGSTVSKATLHNED
FIRNLDLRIGDTVLVRKAGGVIPEIVRNLTELRADHSEPFEFPTHCPECGHAAVRAEGDA
NTYCVNPACPAQAYERLRYFVSRGAMDIRGLGEKLIEQLLQGGLVRDAADFYSLTEAQLA
GLERSGTKKAQNVLRELEESKKQPLWRLVNALGMPGVGERNAQVLTRAFPSLDALLAATP
EQIASIHGVGETLAQSVHAALHDATMTDLLGRLRAADLNTVEEVDAPQGEQLAGTTFVIT
GTLSRPRDVFKAHLESLGARISGSVTKKTTYLLAGEDAGSKLDKARENGVTILDEAALGA
LLTERDAPPVP
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaccgaggcccgctaccgggaactgatccagaccatccaacaccacaaccgcctctac
tacgagcaggacacccccgaaatcagcgacgccgagtatgacgcgctcatgcgggaattg
cgcgccgccgaggccgcacaccccgaatggatcacgcccgaatcgcccacgcagaaggtc
ggtggcgcccccagcagcgccttccagcccgtcacgcaccccacacccatgaccagcctc
gacaacgtattcaacgacgaggaactcacggactggggcgccaaactcgcgcgcgcgctc
ggcgccgccccggacaccgccgactacgcctacacctgcgaactcaaaatcgacggcctc
agcgtcaacctctactacgtggacggcgtcctgcagtgggctgccacgcgcggcaacggc
gtggtgggggagatcgtcaccgaacaggtcctcaccatcccggaaatcccccgcaccctg
cccggcctcaaaggcgaactggaagtgcgcggcgaggtgtacctcagccgcgaggagttc
gccagctacaacgccctcgccgaagaactcgggctgccgctcctcaagaacccccgcaac
ggcgccgccggcgccctccggcagaaagacccgaaagaaaccgcgaaacgccgcctgcgc
gccatcctgtacgccctcggcaaacgcgacggcgtgcccgcccgcacgcaatgggacgtc
ctgacctggctcgcggagcagggcttcccgaccagcgcgtacagcgaacgcgttcagggc
ctcccagcggccgccgcataccacgcccgcatggtcgcggaccgcgcgaacctcccgttc
gacgcggacggcaccgtcatcaaactcgacgacctgcgcgcccaggaggacgccggcttc
acgagccgcgcgccccgctgggccatcgcgtacaagttccccgtcgaggaagtccagacg
aaactcctgagcatcaccatcaacgtcggccgcactgggaagctcgcgccgctcgcgcac
ctcgaaccgcgcctcatcgagggcagcaccgtcagcaaagccacgctgcacaacgaggac
ttcattcgcaacctcgacctgcgcatcggcgacaccgtcctcgtccgcaaagccggcggc
gtcatcccggaaatcgtccggaacctcaccgagctccgcgcggaccacagcgaacccttc
gagttccccacgcactgcccggaatgcggtcacgccgccgtccgcgccgaaggggacgcg
aacacctactgcgtgaaccccgcgtgccccgcgcaggcgtacgaacggctgcggtacttc
gtgagccgcggcgccatggacatccgcggcctcggcgagaagctcatcgagcaactcctg
cagggcggcctcgtgcgggacgccgccgacttctacagcctcacggaagcgcagctcgcg
gggctggagcgcagcggcaccaagaaagcgcagaacgtcctgcgcgaactggaggaaagc
aagaagcaaccgctgtggcgcctcgtgaacgccctcggtatgcccggcgtcggcgaacgc
aacgcgcaggtgctcacgcgcgcgttccccagcctggacgcgctcctcgccgccacgccc
gagcagatcgcgtccattcacggcgtcggcgaaaccctcgcgcagagtgtccacgcagcc
ctgcacgacgcaaccatgacggacctgctcgggcgcctgcgcgccgccgacctcaacacc
gtcgaggaggtcgacgcgccccaaggcgagcagctcgccgggacgacgttcgtgatcacg
gggacgcttagccgaccccgcgacgtgttcaaggcccacctggagtcgctcggcgcgcgc
atcagcgggagcgtcaccaagaaaacgacgtacctgcttgccggagaggacgccggcagc
aagctcgacaaggcccgcgagaacggcgtgaccatcctcgacgaggcggccctcggggcc
ctgctgaccgaacgcgacgcacccccagtcccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system