KEGG   Deinococcus maricopensis: Deima_2085
Entry
Deima_2085        CDS       T01412                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dmr  Deinococcus maricopensis
Brite
KEGG Orthology (KO) [BR:dmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dmr03016]
    Deima_2085
Enzymes [BR:dmr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Deima_2085
Transfer RNA biogenesis [BR:dmr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Deima_2085
 Prokaryotic type
    Deima_2085
SSDB
Motif
Pfam: TruB_N TruB_C_2 HIF-1a_CTAD
Other DBs
NCBI-ProteinID: ADV67728
UniProt: E8U9I9
Position
2257626..2258561
AA seq 311 aa
MPVVVADKPLGLTSHDVVARARRALATRRVGHTGTLDPLATGVLVLCVNDSTKLVQFMEH
DSKDYLAWVSLGAGTPTLDAEGPVDATADVAGVDEAEVRAVLRGFLGVQQQVPPQYSAVQ
VGGQRAYAVARAGGALDLPAREVVLHELELLGVFPSVDAAPRTFAPNEQGQYAPAADGRT
FTLPPALGAFPTLLVRARVGSGTYIRSLARDIGAALGVPAHLAGLVRTRVGHFTLAGAMG
LEDLAVAPVTPDADALDLPRIEATETLALMLRQGKRPRHPLQGRALVLRGQELVAVVDGN
GEQLRVVRAWA
NT seq 936 nt   +upstreamnt  +downstreamnt
atgccggtcgtcgttgcggataaacctctgggcctcacttctcatgacgtggtcgcgcgt
gcgcggcgcgcgctggccacgcgccgcgtggggcacacgggcaccctggacccgctcgcc
acgggggtgctggtgctgtgcgtgaacgacagcacgaagctggtgcagttcatggagcac
gacagcaaggattacctcgcgtgggtgagcctgggtgcaggcaccccgaccttggacgcg
gaaggtccggtggacgcgaccgccgacgtggcgggcgtggacgaagcggaagtgcgcgcg
gtgctgcgcgggttcctgggcgtgcagcagcaggtgccaccacagtacagcgccgtgcag
gtgggcgggcagcgggcgtacgccgtggcgcgcgccgggggggcgctggacctgccggcc
cgcgaggtggtcctgcatgaactggagctgctgggcgtcttcccgagtgtggacgcggcg
ccgcggacgttcgcgccgaacgagcagggacagtacgcgccggcggcggacgggcggacc
ttcacgctgccgccggcgcttggggcgttcccgacgctcctggtgcgcgcgcgcgtgggg
agcgggacgtacatccgcagtctcgcgcgggatatcggcgcggcgctgggcgtgccggcg
cacttggcgggcctagtgcggacgcgggtgggccacttcacgcttgcgggcgccatggga
ctggaggacctggcggtcgcgccggtcacgccggacgcggacgcgctggacctgccgcgc
atcgaggcgaccgagacgctcgcgctgatgctgcgtcagggtaagcggccccgccatccc
ctgcaggggcgcgcgctggtgctgcgtggtcaggagttggtggcggtcgtggacggcaac
ggggagcagctgcgggtcgtgcgcgcctgggcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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