KEGG   Oceanidesulfovibrio marinus: E8L03_02020
Entry
E8L03_02020       CDS       T06743                                 
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
dms  Oceanidesulfovibrio marinus
Pathway
dms00020  Citrate cycle (TCA cycle)
dms00640  Propanoate metabolism
dms00660  C5-Branched dibasic acid metabolism
dms01100  Metabolic pathways
dms01110  Biosynthesis of secondary metabolites
dms01120  Microbial metabolism in diverse environments
dms01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:dms00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    E8L03_02020 (sucD)
   00640 Propanoate metabolism
    E8L03_02020 (sucD)
   00660 C5-Branched dibasic acid metabolism
    E8L03_02020 (sucD)
Enzymes [BR:dms01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     E8L03_02020 (sucD)
SSDB
Motif
Pfam: Ligase_CoA ATP-grasp_2 CoA_binding Succ_CoA_lig CoA_binding_2 FTP
Other DBs
NCBI-ProteinID: QJT07778
Position
447584..449746
AA seq 720 aa
MLCNEHISKKLFHEAGIAVPTGKLLFPEDASSYKPIGVGPWYVKAQVLTGGRGKTGGVVR
VEDPDKLTTVCEKLFAMEINGEAVPLVRVEPAMRFDRELYLSFMVSRDRERIAFTVARGG
GMDVEKQAAAGAGPLVQYLAPSPSGGRLSEHQVRAAFFHLFPSGPEHPENTPEKLKGLWP
GFKALVRKCFDAVKSYGLLLLEINPLVHSDSGEWTALDGKVEIDDAVADIDTTLERFYEP
AHVTPEENAARAAGLAYLRLDGWVGLMANGAGLAMATMDLLNYAGLRAGNFMDLGGAADQ
KRMAKAFDMLFSDERVEMVFLNLFGGIVSCETVARAVAEALAGAAPPKPLVARLAGHGAE
EGRKILTGLGYDSIHLASEVSEAVAILKTLSKNRTLQPFPKDESTSVPRAEAAAKPALQP
ECPAGPATLTELGLSGSTRLLVQGITGRAAMQHVRLMQEYGTTVAAGVTPYKGGQQVHGV
PVFNSVAEAVRKAGPFDASIVFVPAAFAADAVLEAVDNAIPNIVCITEGIPQAQMLYVRR
AVHEAGLRLFGPNTPGLIVPGQTKIGIMPGHVFSPGSIALLSRSGTLTYEAAARLSAAGL
GQSVCIGVGGDPFVGCTFAECFELIRNNTETSAVMVIGEIGGRAEEEFAEVVAASGYDKP
LIAFVSGRTAPPGKRLGHAGAILDESSGGIAGKLHALHAAGFVISPDLESLSMLARKVLG
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgctgtgtaacgagcacatttccaagaagctgttccacgaggctggcatcgccgttccc
accggcaagctgctcttcccggaagacgcatcgagctacaaacccatcggcgttgggccg
tggtacgtcaaggcgcaggtccttaccggcggccggggcaagaccggcggcgtcgtgcgc
gtcgaggacccggacaagctcaccaccgtgtgcgagaagctcttcgccatggagatcaac
ggcgaggccgtgccactggtccgggtggagccggccatgcggttcgaccgcgagctgtac
ctttctttcatggtctcgcgcgacagggagcgcatcgccttcaccgtggcgcgcggcggc
ggcatggatgtggaaaagcaggccgcggccggtgccgggccgctggtgcagtaccttgcc
ccgtcgccctccggcggccggctctcggagcaccaggtccgcgccgcctttttccacctc
tttccctccgggccggagcatcccgaaaacacgccggaaaagctcaaggggctgtggccg
ggcttcaaggccctggtgcgcaagtgcttcgacgctgtgaagtcttacggcctgttattg
ttggagatcaatccgctggtgcactcggacagtggagagtggaccgctctggacggcaag
gtggagatcgacgacgcagtggccgacatcgacaccacgctggagcggttctacgagccc
gcgcatgtgacgccggaggagaacgcggcccgcgccgccgggctggcctatctgcggctg
gacggctgggtcgggctcatggccaacggcgccggactggccatggccaccatggacctg
ctcaactacgccggcctgcgcgccggcaacttcatggacctgggcggggctgcggaccag
aagcgcatggccaaggcttttgacatgctcttttccgatgagcgcgtggagatggttttc
ctcaatcttttcggcggcatcgtctcttgcgagaccgtggcgcgcgccgtggccgaagct
ctggccggggctgcgccgcccaagccgctggtggcgcggctggccgggcacggggccgag
gagggccgaaaaattctcaccgggctcggctacgactccattcacctggcctccgaggtc
agcgaggccgtggccatcctgaagaccctgtccaaaaaccggacgctgcagccgttcccc
aaggacgagtccaccagtgtgccgcgggcggaggcggccgcgaaaccggcgcttcaaccg
gaatgccccgccggccccgccaccctgaccgagctcgggcttagcggttcgacgcggctt
ctcgtgcagggcattaccggccgcgccgccatgcagcacgtcaggctgatgcaggagtac
ggcaccaccgttgccgccggcgtcacgccgtacaagggcgggcagcaggtgcacggtgtg
ccggtgttcaacagcgtggccgaggccgtgcgcaaggccgggcccttcgacgcttccatt
gtgttcgtgccggccgcctttgccgccgacgccgtgctggaagccgtggataacgccatc
cccaacatcgtctgcattaccgagggcattccccaggcccagatgctctacgtgcgccgc
gccgtgcacgaggccggtctgcggctcttcgggcccaacaccccggggctcatcgtgccc
ggccagaccaagatcggcatcatgcccggccacgtgttctctcccggctccatcgcgctg
ctctcgcgctccggcaccctgacctacgaggccgccgcccggctcagcgccgctggcctg
ggccagtccgtgtgcatcggcgtgggtggcgatccctttgtcggctgcacctttgccgag
tgcttcgagctcatccgcaacaacaccgagaccagcgccgtcatggttattggagagatc
ggcggccgggccgaagaggagttcgccgaggtcgttgccgcctcgggctacgacaaaccg
ctcatcgcctttgtctccggacgtaccgcgcctcccggcaaacgtctgggccacgccggc
gccatcctcgacgagtccagcggcggcatcgccggcaagctccatgccctgcacgccgcc
ggcttcgtcatctcgcccgatttggaaagcctgtcgatgctggccaggaaggttttgggg
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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