KEGG   Dehalococcoides mccartyi CG1: X792_04390
Entry
X792_04390        CDS       T03647                                 
Name
(GenBank) recombination protein RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dmx  Dehalococcoides mccartyi CG1
Pathway
dmx03410  Base excision repair
dmx03430  Mismatch repair
dmx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dmx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    X792_04390
   03430 Mismatch repair
    X792_04390
   03440 Homologous recombination
    X792_04390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dmx03400]
    X792_04390
DNA repair and recombination proteins [BR:dmx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     X792_04390
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     X792_04390
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      X792_04390
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AII58009
Position
808519..810219
AA seq 566 aa
MKILANCLWKLKPAPPEKTSQNFPYPPLISRLLHNRGIETVEEAELFLSSDRRLNHNPFL
FPDMEKAVSRIYKALLTGEKIVVYGDFDADGLTATAVLTTGIARLGGNVIPYIPHRVTEG
YGLKISALEKHRTEGVSLIISTDCGITAIPEIKRANKIGLDVIVTDHHTPLDELPPAYAI
INPKVPGETYPFKELAGVGVAYKLIQALYRNLGREDETRDLLDLVAIGTIADIVPILNEN
RYLVKEGIKFLNAEPRPGIIEMAQLSRLHLGEIEPESISWIMAPRLNAAGRLEHALAGYK
LLTATTISDSQELALWLENKNTERQQLTVHFVEKARARLDTQFLPALLIFIDAECPQGIS
GLVAGRLSDEYYRPSIVIKTNADSATGSCRSIPDFNIIQALSRFAHLFSHFGGHAQAAGF
TLPIENLDAFVQGISAYAEETLSGVELKPFIDIDIDTDLSELCPATLRELERLAPFGEAN
PKPVFLSRGLNITDYRSMGSNNEHLKLRIKHKGRFWDGVAFRQAKELNGFLQSPVDIVYN
LEQDKWCGTDTLRLKIIDMSPAGTKI
NT seq 1701 nt   +upstreamnt  +downstreamnt
gtgaaaatattggctaattgcctctggaaactaaaaccggcacctccggaaaagactagc
cagaattttccttatccgcccttgattagccgtttgcttcataacaggggtattgaaacc
gttgaagaagctgagttattcctgtcatcagacaggcgtctaaatcataacccattctta
tttcctgatatggaaaaagcggtcagccgtatctacaaagccttgctgacaggtgaaaaa
atagtagtatacggggattttgatgctgacgggctgacggctacagcagttttaaccacc
ggcattgcccgtttgggagggaatgtaatcccttacattcctcaccgcgttactgaaggg
tatggtttaaaaatatccgcccttgaaaaacaccgaacagagggtgtttcacttatcatc
agcacagactgtggcatcaccgctatacctgaaataaagcgggcaaataaaatcgggctg
gatgtgatagtcacagaccaccataccccgctagatgaactgccgcctgcatatgccatt
ataaaccccaaagtacccggcgaaacctacccttttaaggaactggcaggagttggggta
gcgtacaaacttatacaggctttataccgcaacttggggcgggaagatgaaaccagagat
ttactggacttggtagctataggcacaattgctgatatagtacccattctgaatgaaaac
cgttatctggtaaaagagggcatcaaattcctcaatgccgaacctcgtcccggcattatt
gaaatggcacagcttagccgtctgcatctaggggaaatagaaccggagagcatttcgtgg
ataatggcaccccgcctgaacgcagccggaaggctggaacatgctctggcaggatataaa
ctgcttaccgccaccaccataagtgattctcaagaactggcactctggcttgaaaacaaa
aacaccgaacgccagcagctgaccgttcattttgtagaaaaagccagagctaggctggat
acacagtttctgcctgcattacttatattcattgatgccgaatgtccgcaaggtatcagc
gggcttgtggcaggcagactgtccgatgaatattaccgtccgtctattgttataaagacc
aacgcagattcggctacaggcagttgccgcagcataccggatttcaatatcattcaggcc
ctcagccgctttgcacatctgttcagccacttcggcgggcatgcccaggcagccggtttc
accctgcccatagaaaatttggatgcatttgtccaaggcatatccgcttatgccgaagaa
accctaagcggtgtagaactgaagccgtttatagatatagatatagacacagatctaagt
gaactctgcccggccaccctgcgtgaacttgagaggctggctccattcggagaggcaaac
ccgaaacctgtgttcctaagccgggggctgaatattactgattaccgctccatgggcagc
aacaacgaacacctgaaattgcgtattaaacataaaggccgcttctgggatggagtggcc
tttcgccaggcaaaagaactgaatggttttctccaatccccggtggatatagtgtataat
cttgaacaggataaatggtgcggaacagatacactccgcctgaagataattgatatgtca
cccgcaggtaccaagatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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