KEGG   Dichelobacter nodosus: DNO_0042
Entry
DNO_0042          CDS       T00517                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
dno  Dichelobacter nodosus
Pathway
dno00300  Lysine biosynthesis
dno00470  D-Amino acid metabolism
dno01100  Metabolic pathways
dno01110  Biosynthesis of secondary metabolites
dno01120  Microbial metabolism in diverse environments
dno01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:dno00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DNO_0042 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DNO_0042 (dapF)
Enzymes [BR:dno01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     DNO_0042 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ABQ13375
UniProt: A5EWY0
Position
complement(47892..48728)
AA seq 278 aa
MQPKIFSKMHGLGNDFVVLNCLHLPFSWTKDDISALAHRNCGIGFDQLLLLEPPKSSAAD
FSYRIFNADGSEVEHCGNGARCLGKYIRDNGLFDFTRPAVVQTQKRTIIIDYCGVQNGSE
LFRVQMGVPDFSPFTTLQTSALAQPLSLAAGHFECGIVSMGNPHAVICVDDVETAAVTAI
GSALQQHPLFPQRVNVGFMQIINREHIRLRVFERGVGETLACGTGACAAVSVGIARGDLA
QTVHVDLRGGSLIIDWAGEKEPLFMTGSATAVYHGQIL
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcaacccaaaatttttagcaaaatgcacggcttgggcaatgatttcgttgttttaaat
tgcctgcatctgcctttttcttggacgaaagatgacatcagcgcgctggcgcatcgcaat
tgcggcattggttttgatcaacttttgttgctcgaaccgcccaaaagcagcgctgccgat
ttttcctaccgtatctttaacgcggacggaagcgaagtagaacattgcggcaacggtgcg
cggtgtttggggaaatatattcgcgataacggattatttgattttacgcgtcctgccgtg
gtgcaaacacaaaaaagaaccatcatcattgattattgcggcgttcaaaatgggagtgaa
ctgtttcgcgttcaaatgggcgtgcccgatttttcaccttttaccacgctgcaaacaagc
gcactggctcaaccgttgtcgctggctgcagggcattttgaatgcggcattgtttcaatg
ggcaatccgcacgcggtgatatgcgttgatgacgtggaaacggcagcagttactgcgatc
ggcagcgcattgcaacaacacccattatttccgcaacgcgttaacgtggggtttatgcaa
atcattaatcgagaacatattcgcctgcgcgtttttgaacgcggcgtgggcgaaacttta
gcttgcggaacgggcgcgtgcgcggcagtttccgtcggcattgcgcgtggtgatttagcg
caaacggtgcacgttgatttgcgtggcggttccttaattattgattgggcaggagaaaaa
gaaccgctttttatgacgggcagcgccacggcggtttaccacgggcaaattctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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