KEGG   Dichelobacter nodosus: DNO_0114
Entry
DNO_0114          CDS       T00517                                 
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
  KO
K05788  integration host factor subunit beta
Organism
dno  Dichelobacter nodosus
Brite
KEGG Orthology (KO) [BR:dno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dno03032]
    DNO_0114 (ihfB)
   03036 Chromosome and associated proteins [BR:dno03036]
    DNO_0114 (ihfB)
   03400 DNA repair and recombination proteins [BR:dno03400]
    DNO_0114 (ihfB)
DNA replication proteins [BR:dno03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DNO_0114 (ihfB)
Chromosome and associated proteins [BR:dno03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    DNO_0114 (ihfB)
DNA repair and recombination proteins [BR:dno03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      DNO_0114 (ihfB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: ABQ13284
UniProt: A5EWQ2
Position
122092..122382
AA seq 96 aa
MTKSELIERLVMKYPQLRAQDVEDTVKLMIERICHTLEKGDRVEIRGFGSFSLHYRESRQ
GRNPKTGESVRVPAKSIPYFRAGKELRERVDEEINQ
NT seq 291 nt   +upstreamnt  +downstreamnt
atgacaaaatctgaattaattgaacgtttagtgatgaagtatccccagttgcgcgcgcaa
gatgttgaagatactgtaaaattgatgattgaacgcatttgccatactttggaaaaaggc
gatcgtgtagaaattcggggttttggcagtttttctcttcattatcgtgaatctcgccaa
ggacgtaatcccaaaacgggcgaatctgtacgcgttcctgccaaatcaattccttatttt
cgtgctggaaaagaattgcgtgaacgggttgatgaagaaataaaccaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (51)   

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