KEGG   Dichelobacter nodosus: DNO_1165
Entry
DNO_1165          CDS       T00517                                 
Symbol
recB
Name
(GenBank) exonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
dno  Dichelobacter nodosus
Pathway
dno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DNO_1165 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dno03400]
    DNO_1165 (recB)
Enzymes [BR:dno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DNO_1165 (recB)
DNA repair and recombination proteins [BR:dno03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DNO_1165 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_22 PDDEXK_1 SLFN-g3_helicase Kinesin
Other DBs
NCBI-ProteinID: ABQ14054
UniProt: A5EXI1
Position
1210835..1214431
AA seq 1198 aa
MSPEIMDFPLSGKVLIEASAGTGKTYTLTGILLRLLLSEVPSKGIFARAPEAIIATTFTR
KAAAEMRMRLKMRLNAMHHLLQALAQTLLQSDEEETDYYAHIAHLLTLWAENAQTPAEKA
AQESLNHALILEAVQENGIDGFTDLCQRCNSVIATLDRLFIGTLDSLCQHWLRMFSLETG
TAQSTKLVDGHEEITEIVHQQLRQFYWQYSDYHEYLSSINPPAHYAKAISGQLNYADAAV
DEIDVPSDENFAALLEQTKNTKMDDFLALFASQKIVSKLTDPELLWQALLTQTPIDEENI
KIIETWHNAVKTGEGFLKAAKSEQIETICQHDCAPIFLAVTSAFLAQKNLNKTLAACAAK
ETLLAVRSQLPAQLEMQGKATFNHYTARLNQALAGESGAALARYIAHRYPVLLVDESQDL
NAQQAQFIERIYLKNLEADRHFLLLVGDPKQAIYRFRGGDVANYLRLKAAFSQQECYSLT
KNYRSSPALIAALNKLYQDRAAFGGGIDYEPMTAAVTQRALQSVDGAAITPPLYWLETKN
DNEHLAIVHLIQNLTAKNSIYAYHDKQNRRPLRYSDILVLGTSRSKLEELQILLQQHGIN
VDYSAEKSIFASDLAAAIATFLAAMLAPQQQEQLNRLFISPFFRLSLAELTALSQPSSAL
NYAQLSAVLTEAEQLWQQKKLLSALQLFLTTDFAGLTIWERLARLPYPENERALLDLRQL
QQIIADRGRLDTLDQFLRWWKFMLTTLPTADWAKMMPLPSQDALRLMTIHSAKGLQAPVV
IISGLGKHRKHDALFYPYHTATGDFRIATEKVEENQQEDDDEKARLLYVGLTRAEDLLFV
ALQSLRKKDGDFFADAHAGMKRLDPVRFKNTAVNHGFLSVNPEELAQRLTQPQYTLSSAS
ETIATIEQDPTYPRQRFYGWSKSSFTALTRYVDENTVDISLPDYAEEEAESETIADPDLA
LPARFARGTKAGSFLHQLLKDLPETPAQFWRGHIERLAKQYRLLERTAALDDYAQYEAWF
QAIMASPLVSQTTLAALSPAQKVDEMKFILHVAGKSFNISAVNRLFERWEKPLTLHQKQA
SIRFLCGEIDFCYQQDDKYYFIDYKSNYLGTAPQEYHVSAMKKAMNEHHYWLQALIYQTA
LHRFLQTRLKNYQPALHLGYPEYFFIRGVDAEEQTLGHFPVDLPLDLVLEFDAILSGH
NT seq 3597 nt   +upstreamnt  +downstreamnt
atgtcccccgaaattatggattttccgctttctggaaaagtactcattgaagcttccgcc
ggcaccggaaaaacgtataccttaaccggtattttgctgcgtttattgctttcggaagtg
ccttcaaaaggaatttttgcgcgcgcgccggaggcaattattgccactacgtttacccgt
aaagccgcggcagaaatgagaatgcggttaaaaatgcggttaaacgccatgcatcattta
ctgcaagcgctcgcgcaaactttattgcaatccgatgaagaagaaacggattattacgcg
cacatcgcgcatttgttgactttgtgggcagaaaatgcgcaaacgccagcggaaaaagcg
gcgcaagaatcgctcaatcacgctttgattttagaagcagtgcaagaaaacggtatcgat
ggttttactgatttatgtcagcgctgcaacagcgttattgccacgctcgatcggttgttt
atcggcacgctggattctttatgccaacattggttgcgcatgttttctttggaaacgggt
accgcgcaatccacaaaactggttgacgggcacgaagaaattacggaaatcgttcatcaa
caattgcgccaattttattggcaatattctgattatcatgaatatttatcctcaatcaac
ccgccagcacattatgccaaagccatcagcggtcaactcaattatgctgatgctgccgtt
gatgaaattgatgttccgagcgatgaaaactttgccgcgcttttagaacagacaaaaaac
acaaaaatggacgattttttagcgttatttgcttcccaaaaaatcgtttctaaattgacg
gatcccgagcttttatggcaagcgttattaacgcaaacgccaatcgatgaagaaaatatt
aaaattattgaaacatggcataacgcggtaaaaacgggggaaggcttcttaaaagcggca
aaatcagaacagatcgaaaccatttgccagcatgattgcgcgcccatttttttagccgtc
acttcagcctttttagcgcaaaaaaatttaaataaaacgctcgctgcctgcgcggcaaaa
gaaactttattggcggtgcgctcgcaattgccggcacaattggaaatgcaaggaaaagcc
acatttaatcattacaccgcgcgccttaatcaagcgttagccggcgaaagtggcgcggcg
ctggcgcgttatattgcgcatcgttatccagttttattggtggacgaatcgcaggattta
aatgcgcagcaagcacaatttatcgagcggatttacctcaaaaatttagaagccgatcgg
cattttttattattggtcggcgatcctaaacaagcaatttatcgttttcgcggcggcgat
gtggcgaattatttacggttaaaagcggcgttttcgcagcaagaatgctattccttaacg
aaaaactatcgttcgagtccggcattaatcgcggctttaaataagctttatcaagatcgc
gcagcttttggcggcggtattgattatgaaccgatgacggcggcggtcacgcagcgcgcg
ctgcaaagcgttgacggcgcagcaatcaccccccccctttattggttagaaaccaaaaac
gataacgaacaccttgctatcgtgcatctgattcaaaatttaaccgcaaaaaacagcatt
tatgcttatcacgataaacaaaatcgccgcccgttgcgctacagcgatattttggtatta
ggaaccagcaggagcaagctcgaagaattgcaaattttgctgcaacaacacggtattaac
gttgattattcagcggaaaaaagtatttttgccagcgatttggctgccgcgattgccact
tttttagcggcgatgttagcaccgcagcagcaggaacagttaaatcgcttgtttatcagt
cctttttttcgtttatctttggcagaactgacggcattatcgcagccgtcatctgcttta
aattatgcgcaattgagcgcggttttgacggaggcggagcaattgtggcaacagaaaaag
ttgttatccgccttgcaattatttttaaccactgattttgccggtttgacgatttgggag
cgtttggcgagattgccttatccggaaaatgaacgcgctttgctggatttgcggcaattg
caacaaattattgccgaccgcgggcgcctcgatacgctggatcaatttttgcgctggtgg
aaattcatgctgacaacgttgccaactgctgattgggcaaaaatgatgccgttgcccagt
caggacgcgttgcgtttgatgacgattcacagcgctaaaggtttacaagcgcccgtcgtt
attatcagcggtttgggaaaacatcgtaagcatgacgcgcttttttatccttatcatacg
gcaaccggcgattttcgtattgctacagaaaaagttgaagaaaatcagcaagaagacgat
gacgaaaaagcgcggttattgtatgtaggattaacgcgggcggaagatttgctttttgtt
gcgttgcaatcattacgcaagaaagatggagatttttttgccgacgctcatgccggcatg
aaacgtcttgatcccgttcgttttaaaaatacggcagtaaatcatggttttttaagcgtt
aatccggaagagcttgcccaacgtttaacgcaaccgcagtacacgttatcttccgcgtcc
gaaacgattgcgacaattgagcaagatccgacttatccgcgtcaacgtttttacggctgg
agtaaaagcagttttacggctttgacgcgttatgttgatgaaaatacggtggatatttct
ttgccggattatgcggaagaagaagcggaaagcgaaacgatcgcggatccggacttggcg
ttaccagcgcgatttgcgcgcggcacaaaggcgggaagttttttgcatcaattattgaag
gatttgcccgagacgccggcgcaattttggcgcggtcatattgaacgtttagcaaagcaa
tatcgtttgcttgaacgcacggcggcattagatgattacgcgcagtatgaagcgtggttt
caagcgattatggcatcaccgctggtttcgcaaacaactttagcggcattgtcgccggcg
caaaaagtcgatgaaatgaaatttattcttcatgtggcaggaaaatcgttcaatatttct
gcggtcaatcgtttattcgaacgttgggaaaagccgttaacgttgcatcaaaaacaagcg
tctattcgctttttatgcggtgaaatcgatttttgctatcaacaggacgataaatattat
ttcattgattataaatcaaattatttgggaaccgcgccgcaggaatatcatgtttcggcg
atgaaaaaagcgatgaatgagcatcattattggttgcaggcgttgatttatcaaacggcg
ctgcatcgttttttgcaaacgcgtttaaaaaattatcagccggcgttgcatttaggttat
ccggaatatttttttattagaggcgttgatgcggaagaacaaacgctcgggcattttcct
gtggatttgccgctcgatttggttttggagtttgacgcgattttatccggacattaa

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