KEGG   Diuraphis noxia (Russian wheat aphid): 107161408
Entry
107161408         CDS       T04900                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
dnx  Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03020  RNA polymerase
dnx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dnx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107161408
  09124 Replication and repair
   03420 Nucleotide excision repair
    107161408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dnx03021]
    107161408
   03400 DNA repair and recombination proteins [BR:dnx03400]
    107161408
Enzymes [BR:dnx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107161408
Transcription machinery [BR:dnx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     107161408
DNA repair and recombination proteins [BR:dnx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107161408
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 107161408
NCBI-ProteinID: XP_015363289
Position
Unknown
AA seq 1862 aa
MAASDSKAPVRTVKRVQFGILSADECRRMSVTEGGIRFSETMEGGRPKLGGLMDPRQGVI
DRFSRCQTCAGNMTECCGHFGHIELAKPVFHIGFLTKAIKILRCVCFYCSKLLVSPTHPK
VKEIVMKSKGQQRKRLAFIYDLCKGKNICEGGDELDINKDNVNDANMPPKKQGHGGCGRY
QPTIRRIGLDLTAEWKHVNEDSQEKKIPLTAERVYEILKHITDEEVVIMGMDPKFARPDW
MILTVLPVPPLPVRPAIVMFGSMRNQDDLTHKLSDIIKCNNELIRNEQSGAATHIIAENI
RMLQYHVATLVDNDSPGLPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDEVGVPRTIAQNMTFPEIVTPFNIDQMLELVRRGNSQYPGAKYIIRDNGERI
DLRFHPKPSDLHLQCGYKVERHIKDGDLVVFNRQPTLHKMSMMGHRVRVLPWSTFRMNLS
CTSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAIRK
MTKRDVFIEKEQMMNLLMHLPIWDGKMPTPCILKPKPLWTGKQLFSLIIPGNVNMIRTHS
THPDEEDNGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGR
FYGNIQTVVNNWLLYEGHSIGIGDTIADPQTYLEIQRAIKKAKEDVIEVIQKAHNMDLEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNSLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQSIA
TIEPSHKKFENEFKFDISNERHMRKIFTEDVLKDMMGSNDTVAVLEKEWEQLTNDRDTLR
EIFPSGESKVVLPCNLKRMIWNVQKIFHINKRGPTDLNPVKVVNGVKKLLDKCVIVAGED
ELSKKANKNATLLFQCLVRSTLCTKLVSENFRLSSEAFEWLVGEIENRFKQAQAQPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIREDQEFVNVYYEMPDFDPTRI
SPWLLRIELDRKRMTDKKLTMEAISEKINAGFGDDLNCIFNDDNADKLILRIRIMNGEDG
KMNGGDDEDTVDKMEDDMFLRCIEANMLSDMTLQGIDSIGKVYMHLPQTDSKKRIIITET
GEFKAIADWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFSVLGIEAVRKSVEKEMNTV
LQFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASH
AEVDPMRGVSENIIMGQLPRMGTGCFDLLLDAEKAKDGIEIPMDNGYMGMGGGGMFMAAG
TPSMSPAMTPWDQTSTPIYQNSWSSSLETGMTPGGPGFSPAGSSEASGTSPFWMSSGGTP
GSPGSPSMATSPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTNYSPTSPQYSATQQNTPK
YSSMSPNYNYSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQY
AASSPSYTPSAASGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGG
TQYNQSYSPSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGPD
ES
NT seq 5589 nt   +upstreamnt  +downstreamnt
atggcagccagcgattcaaaggctccagtccgaactgtcaaacgtgtgcagtttggtata
ttatctgcagacgaatgccgtcgcatgtctgtcaccgaagggggcattcgcttttcagaa
acgatggaaggtggacgccccaagcttggtgggctcatggacccccgtcaaggagttatt
gatcgtttctcaagatgtcaaacttgtgcaggtaacatgaccgaatgttgtggacatttt
ggccatattgaacttgctaaaccagtatttcatataggatttctaaccaaagccataaaa
attctacgttgtgtctgcttttactgttccaaattattagttagtcctactcatcccaaa
gtaaaagaaattgttatgaaatcaaaaggacaacagagaaaacgattagcttttatttat
gatttatgtaaaggaaaaaatatttgtgaaggaggtgatgaactggacatcaataaagat
aatgttaatgatgcaaatatgcctccaaagaaacaaggtcatggtggttgtggtcgttat
caaccaactataagacgtattggtttggatttaacagctgaatggaagcatgttaatgaa
gattctcaagagaaaaaaataccacttacagccgaaagagtctatgaaattttaaaacat
attactgatgaagaggttgtaattatgggcatggatcccaaatttgcacgtcctgattgg
atgatattgacagtgctacctgttcctcctttacctgtacgtccagcaattgttatgttt
ggatcaatgagaaatcaagatgatttgactcataaactgtctgatatcataaagtgtaat
aatgaattaattcgtaatgaacagtctggtgctgctactcatattatagctgaaaatatt
agaatgttacaatatcatgtagcaactttggttgataatgatagtcctggcctaccgaga
gcaatgcaaaaatctggcaagccgttaaaagcaattaaagctcgtttaaaaggcaaagaa
ggcagaatccgaggaaacttgatgggaaagcgtgtagatttttctgctcgaactgttata
acacctgatccaaatttacgaattgatgaagttggtgtacctcgtactattgctcaaaat
atgacctttccagagatcgttactccatttaacattgatcaaatgctggaattggttcgt
cgtggtaattcacaataccctggtgccaagtacattatacgtgataatggtgaaagaatt
gatttacgttttcatcctaaaccttcagatttacatttgcaatgtggttataaagttgaa
agacacataaaggatggcgatttagtagttttcaacagacagcctactttacacaaaatg
agtatgatgggtcacagagtgagagtcttaccttggtctacatttcgaatgaatttaagt
tgtacgtctccatataatgctgattttgatggtgatgaaatgaaccttcatgttccacaa
tctatggaaacaagagctgaagtagaaaatattcatattacaccaaggcaaattattact
ccccaagctaataaacctgttatgggaattgtacaagatacattgacagccatcaggaaa
atgacaaaaagagatgtatttattgagaaggaacaaatgatgaatttactaatgcatctt
cccatctgggatgggaaaatgccaactccttgtattttaaaaccaaaaccattgtggact
ggaaaacaactcttttctttaattatcccaggaaatgtcaatatgattcgaactcactcc
actcatccagatgaagaggataatggaccttacaaatggatatcgcctggtgatacaaag
gtaatggttgagcatggtgagttggtgatggggatattatgtaagaagacwttaggtaca
tcagctggatcattgcttcatatatgtatgttagaattgggacatgaagtatgtggacgg
ttctatggtaatattcagactgtagttaataactggcttttatatgaaggtcattctatt
ggtattggtgatactattgctgatcctcaaacttatttggagattcaaagagcaattaaa
aaagccaaagaagatgtaatagaggtgatacaaaaagcgcataatatggatcttgagcca
acaccaggtaacactctccgtcagacttttgaaaatcaagtaaacagaattttaaatgat
gctcgtgacaaaactggaggctctgctaaaaaatctttgactgaatacaatagtcttaaa
gctatggtagtttctggttccaaaggttcaaacattaatatttctcaggttatcgcttgt
gtaggtcaacaaaatgtagaaggtaaacgtataccatttggttttcgaaaacgtacatta
ccacattttattaaagatgattatggtccagaatcaagaggttttgtagaaaattcttat
ctggctggacttactccttctgagttctacttccatgctatgggaggkcgtgaaggtctt
attgatactgctgttaaaactgctgaaacaggttatatccaaagacgtttgatcaaagct
atggaatctgttatggttcactatgatggaactgtacgtaactctgttggtcaattgatt
cagttgcgttatggagaagatggtctttgtggagaggcagttgaattccagagtattgct
actatagaaccgtcacataagaaatttgaaaatgaatttaaatttgatatttcaaatgag
agacatatgagaaaaatattcactgaagatgttttaaaagatatgatgggtagtaatgat
actgtagctgtattagaaaaagaatgggaacaattaactaatgacagagatactctaaga
gaaatattcccwtcgggtgaaagcaaggtagtattaccttgtaatctgaaacgtatgatt
tggaatgttcagaaaatttttcacatcaataaacgaggaccaacagacttgaatcctgta
aaagttgtgaatggagtcaaaaaactattagacaaatgtgttatagtagctggggaagat
gagttaagcaagaaagctaataaaaatgctactttattatttcaatgtttggtgcgttct
actctgtgtactaaattagtttctgaaaatttccgcctctcttctgaagcatttgaatgg
ttagttggtgaaattgaaaacagatttaaacaagctcaggcacaacctggtgagatggtt
ggagcattagctgctcaaagtttaggagaacctgctactcaaatgacattgaatactttt
cattttgctggtgtatcttcaaaaaatgtaactctaggagtaccaagactaaaagaaatt
attaatataagtaagaagcccaaagcaccatcactaactgtgtttttgactggagcagct
gctagagatgcagaaaaggccaaaaacgtattatgtcggcttgagcatacaacattgcgt
aaagtcacagcaaacacagctatttattatgatcctgatcctcaaaatacagttattaga
gaagaccaagagtttgtaaatgtttattatgaaatgcctgattttgatcctacacgaatt
tctccatggttgttgcgaattgaattagatagaaaaagaatgactgataaaaaattgact
atggaagctatatctgaaaagatcaatgcaggatttggagatgacctcaattgtatattc
aatgatgacaacgctgacaagttaattttacgtatacgtataatgaatggtgaagatggt
aaaatgaatggtggtgatgatgaagatactgttgataaaatggaagatgatatgttcctg
agatgtattgaagctaacatgttatctgatatgactttacaaggtattgattctattgga
aaagtgtatatgcatttaccacaaacagattctaaaaaaagaataattattacggaaact
ggggaatttaaggcaattgctgattggttgttagaaactgatggtacaagtttgatgaaa
gtcttgagtgaaagagatgttgatcctgttagaacattctccaatgacatttgtgaaata
ttttcggttttgggtattgaagctgtacgtaagtcagttgaaaaagaaatgaatactgtg
ttgcagttctatggtttatacgtaaattatcgtcatttagcattattgtgtgatgttatg
acagccaaaggccatttaatggccattactagacatggtataaatagacaagatacagga
gcattaatgagatgctcgtttgaagaaacagtcgatgttttattagatgctgcttctcat
gctgaagttgaccctatgagaggtgtatctgaaaacattattatgggacaattgcctaga
atgggaacaggttgtttcgatttgcttttggatgctgaaaaagccaaagatggtatagaa
attccaatggataatggttatatgggtatgggtggcggtggcatgttcatggctgctggc
acgccttctatgtcaccagctatgactccatgggatcaaacatccacaccaatttatcaa
aatagttggtcttcaagcttggaaactggcatgactcctggaggacctggcttttcacca
gcaggttcaagtgaagctagtggaacttctccattctggatgtcatctggaggaactcca
ggcagtcctggatctccaagcatggccactagtccatatgtgcctagccctagttccatg
tcaccaaactataattatccttctagcccacagtttggttctttatcaccttctatgact
cctactaattattcaccaacaagtccacaatactctgctacccaacaaaatactccaaaa
tactcttcaatgtctcctaattacaattattccccaacaagcccatcatactcaccgact
agcccttcatactctcatacttcatattctccaacaagtccttcctacagcccaacatct
ccttcgtacagccctacatctccgtcttacagtccaacatctccatcgtatagtccaacg
tctccatcatatagcccaacatctccgtcatatagccctaccagtccgtcatatagccct
acgtctccatcttacagtccaacatcaccatcatacagtccaacttcaccatcgtacagc
cctacatcgccgtcgtacagtccaacatcaccttcttacagtccaagctctccacaatat
gcagcttcttcgccatcatatacacctagtgctgcatctgggacaagcaattacaaatat
tcacctacttcgccttcactggctgtcagtcctacatactcccctaccagtccaatgtac
tcgccttcaaatgcttcttattctccatcttctctacagcatacaccaaatgctggaggt
acacaatacaatcagtcatatagtccaagttcgcctgtttattcacctaccaatttctcc
atggcaagtccaaggtattctcctacttcgccaacttattcacctggtgttggaagtccg
cattattctccatcatcgccgagttattcgccaacgtctccaaattatagtggaccagat
gagtcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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