KEGG   Desulfomicrobium orale: AXF15_04070
Entry
AXF15_04070       CDS       T04289                                 
Name
(GenBank) hypothetical protein
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
doa  Desulfomicrobium orale
Brite
KEGG Orthology (KO) [BR:doa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:doa03016]
    AXF15_04070
Enzymes [BR:doa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     AXF15_04070
Transfer RNA biogenesis [BR:doa03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AXF15_04070
SSDB
Motif
Pfam: RNB RNase_II_C_S1
Other DBs
NCBI-ProteinID: AMD92366
UniProt: A0A0X8JP92
Position
910407..912443
AA seq 678 aa
MLIPSPLQPGCIVEFLQDNQPVTAWVLDIQGPRLRVFTIGQREMKLPATRVLPWVGPQCA
PGASRQDMLDLLRTHHGRRERVAEEVDALEIWELAQGELAEAEIGWFASLVFEDPAPDQM
AGLGRKLLQTKTHFRFSPPRFEIYSQEVVDRRQEELRKAQERERLVGFGQVFLRGLWEAF
CNRKNTAPQPDEEQAERIGKLLMTRIVSPDDRDSEMLWRTMSQGLPDDPFLPLYLAQAWG
LVPAHFNVYLARAQYDWEPRWEEYAAELRALRERVEKLKTAPVAEIVTIDAPTTRDIDDG
FSLEATADGFILRQALACPPFGWEFGSPLDSAVQHRFSSLYLPEGTSHMLPEELGTDFFS
LVGGTERPALVITFDLDSEAGLRRVMPEIGWVRVAANLTYAGVEEDLARGGSLMMEEARR
LAGLLRAARIREHAVILEQPDPYLTLCGDSGHPEVTVDEPSPAPDAQMIVSEFMILANKA
MGAWGLVEGVPLLYRTQNITLPAECAGVWRDPVDIYRIINNMGPSILECEPRRHATIGAE
AYAPMTSPLRRYSDFINMAQILARLTGTGRLLDRTGLENLLPVLSGRAEAVNQVQRLRVR
YWKYEYFRQNYKKMRWSGVLVDAGPVLVTIALPELQLFLKAPRKIFGDKFHPGQRFSVRV
GKVDPLAGEIRIAEAWEE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgctgatcccttctccactccagccaggctgcattgtggagtttctgcaggacaaccag
cccgtcacagcctgggtactggacatccagggcccccggctgcgcgtcttcaccatcggc
cagcgggagatgaaactgcccgccacccgtgttctgccctgggtggggccgcagtgcgcg
cccggagccagccgccaggacatgctcgaccttctgcgaacccatcacggccgccgtgag
cgcgtggccgaggaagtggacgctctggaaatctgggagctggctcagggcgaattggcc
gaggccgaaatcggctggttcgcgagcctcgttttcgaggaccccgcgccggatcagatg
gccggtctggggcgcaagcttctgcaaaccaagacacatttcaggttttcgccgcccagg
ttcgaaatttattctcaggaggtggtggaccgcagacaggaggaactgcgcaaggctcag
gagcgcgagcgtctggtgggcttcggtcaggtttttctgcgcggcctgtgggaggccttc
tgcaaccgcaagaatacggccccgcagccggacgaggagcaggccgagcgcataggcaag
ctgctcatgacccgcatcgtaagtcccgacgaccgggattccgaaatgctgtggcggacc
atgagccaggggctgcccgacgatcccttccttcccctgtacctggcccaggcttggggg
ctcgtacccgcccatttcaacgtgtacttggccagagcccagtacgactgggagccccgc
tgggaggagtacgcggcggagctgcgcgccctgcgggagcgcgtggaaaagctgaagacc
gctccggtggcggaaatcgtgaccatcgatgcccccaccaccagggacatcgacgacggc
ttcagccttgaagccacggcggacggttttattctgcgccaggccctggcctgcccgccg
tttgggtgggaattcggctctcccctggacagcgccgtacagcaccgcttttcctcgctg
tatctgcctgagggcaccagtcacatgctccccgaagaactggggacggactttttcagt
ctggtcggcggtacggaacgtccggccctggtcattaccttcgatttggacagtgaggcc
ggtttgcggcgggtcatgccggaaataggctgggtgcgcgtcgcggccaacctcacctat
gctggcgtggaagaggatctcgcccgcggtggctctctcatgatggaggaggcccggcgt
ctggccggacttctgcgggccgcccgcatccgcgaacacgccgtgattctggaacagccg
gatccgtatctgaccctgtgtggagactccggacacccggaggtgaccgtggacgaaccc
agcccggcccccgacgcccagatgatcgtgtccgagttcatgattctggcgaacaaggcc
atgggagcctggggcctcgtggaaggggtgcctcttctgtaccgcacccagaacatcacc
ctgcccgccgagtgcgccggagtctggcgcgatcctgtggacatctaccggatcatcaac
aacatgggcccttccattctggaatgcgaaccccggcggcacgccaccatcggggccgaa
gcctacgctcccatgacttcccccctgcggcgctattccgatttcatcaacatggctcag
attctggcccggttgaccggaacagggcgtcttctggaccggaccggactggaaaatctg
ttgccggttctgtcgggccgggccgaagccgtaaatcaggtgcagcggttgcgggtgcga
tactggaaatacgagtacttccgccagaattacaaaaagatgcgctggtccggtgttctg
gtggacgcaggccctgtgctggtgaccatcgccctgccggaactgcagctttttctgaaa
gcgccgcgcaagattttcggcgacaagttccatcccggccagcgtttttccgtgcgtgtg
ggcaaagtggacccgctggccggagaaatccgcattgccgaagcctgggaagaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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