KEGG   Desulfomicrobium orale: AXF15_04635
Entry
AXF15_04635       CDS       T04289                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
doa  Desulfomicrobium orale
Pathway
doa02020  Two-component system
doa02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:doa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AXF15_04635
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AXF15_04635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:doa03021]
    AXF15_04635
Transcription machinery [BR:doa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AXF15_04635
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 MutS_III Sigma70_r3 DEAD_assoc
Other DBs
NCBI-ProteinID: AMD92467
UniProt: A0A0X8JPH8
Position
complement(1020966..1022396)
AA seq 476 aa
MGLELRQNLKLTQQLVMTPQLQQAIKLLQLSRFELLEAVQQEMLENPMLEEAPREISEEA
EIPDSAGDDPREFTFEEADLVHNADWENYLGDFSSTAKQAQFKETEALEEMTSYEARLAG
KPSLEGHLLWQLRLSNITEEEKAIGEAIIGNLDSQGYLEASAEEIAAENGFSPAQVEAVL
YHIQRFDPVGVAARSPRECLLVQLDVQEHDDPILLSLVGDHLEDIEKRRYKPLLRKFRIQ
LEDLKVYLDIIQSLDPLPGASYGSESTVYVSPDVFVYEYENDFVIVMNDDGLPRLQLSPY
YMEDMNLTAKGAEREYLHDKMRSAMWLMKSLHQRQKTLYKVVESIIRFQLDFFEHGVTRL
KPLILKDVADDIEVHESTVSRITTNKYVATPHGIFELKFFFNSALEMDDGTQVGSESIRA
VIKKMVSEENPRKPYSDEKIAAVLKEKLDVNIARRTVAKYRAVLGIESSSKRRQIF
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgggtcttgaactccgtcagaatctcaagctgacccagcagctggtcatgacgccccag
ttgcagcaggccatcaaactgctgcaactgtcgcgttttgaactgctggaagccgtacag
caggaaatgctggaaaaccccatgctcgaagaggctcccagggagatctccgaagaggcg
gaaattccggattcggcaggcgacgatccacgggagttcacttttgaagaagcggacctt
gtccacaacgcggactgggaaaactatctgggcgatttttccagcaccgccaaacaggcg
cagttcaaggagacggaagctctcgaggaaatgacctcctacgaggcccggctcgcgggc
aaaccgtctctggaaggacacctcctgtggcagcttcggctgtccaatatcaccgaggaa
gaaaaggccattggcgaagccatcatcggcaacctggactctcagggctacctggaggcc
tctgccgaggagattgccgccgaaaacggattttctccggcccaggtggaagccgtcctg
tatcacattcagcgtttcgatcccgtgggagtggccgcgcgttcccccagagaatgtctg
ctggtgcagctggacgtacaggaacatgatgatcctatcttactctctctggtgggcgac
catctggaagatattgaaaaacgccgctacaaacccctgctgcgtaaatttcgaatccag
ctggaggatctgaaagtctatctggacatcatccagtctctggatcccctgccgggggcc
agttacggcagcgaaagcacggtctatgtcagccccgacgtttttgtgtacgaatacgaa
aatgatttcgtcattgtcatgaatgacgacggcctgccccgccttcagctcagtccctac
tacatggaggacatgaacctgacggccaagggggcggagcgggaatatctgcacgacaag
atgcgttcggccatgtggctgatgaagagcttgcaccagaggcagaaaaccctgtacaag
gtggttgaaagcatcatccgcttccagctcgattttttcgagcatggagtgaccagactc
aagccgcttattctgaaggatgtcgccgacgatatcgaggtgcacgaatccaccgtgagc
cggatcacgaccaacaaatatgtagccaccccccacggcattttcgagttgaaattcttc
ttcaactccgctctggaaatggatgacggcacccaggtcggctcggaatccatccgggcc
gtcatcaagaagatggtcagcgaggaaaatcccagaaagccttacagcgacgaaaagatc
gcggccgtattgaaagaaaagctggatgtgaacattgcccggcggaccgtggccaaatac
cgggcggtacttggcatcgaatcgtcctccaagcgcagacagattttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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