KEGG   Denitratisoma oestradiolicum: DENOEST_1627
Entry
DENOEST_1627      CDS       T06737                                 
Symbol
hupA
Name
(GenBank) HU, DNA-binding transcriptional regulator, alpha subunit
  KO
K03530  DNA-binding protein HU-beta
Organism
doe  Denitratisoma oestradiolicum
Brite
KEGG Orthology (KO) [BR:doe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:doe03032]
    DENOEST_1627 (hupA)
   03036 Chromosome and associated proteins [BR:doe03036]
    DENOEST_1627 (hupA)
   03400 DNA repair and recombination proteins [BR:doe03400]
    DENOEST_1627 (hupA)
DNA replication proteins [BR:doe03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DENOEST_1627 (hupA)
Chromosome and associated proteins [BR:doe03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DENOEST_1627 (hupA)
DNA repair and recombination proteins [BR:doe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DENOEST_1627 (hupA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG PT-TG DUF2267 HYPK_UBA HU-CCDC81_euk_2 HU-DNA_bdg HU-CCDC81_bac_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: CAB1368792
UniProt: A0A6S6Y0U3
Position
I:1681195..1681491
AA seq 98 aa
MNKSELIEAVAKTAEITKADAERALAATLGTIVKAVSKGDSVTLVGFGTFKSAKRAARTG
RNPQTGKEIKIAATTVPRFTAGATFKAAVSGKKAAKKK
NT seq 297 nt   +upstreamnt  +downstreamnt
atgaataagtctgaactcatcgaagctgtcgccaaaaccgcagagatcaccaaggcggat
gccgagcgtgcgcttgccgccaccctggggactattgtgaaagcggtctccaagggtgat
tccgtcaccctggtgggctttggcaccttcaagtccgccaagcgtgcagcgcgtaccggc
cggaatcctcagaccggcaaggaaatcaagattgccgccaccaccgttccgcgctttacc
gccggcgcaaccttcaaggctgccgtttctggcaaaaaggctgcaaagaagaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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