KEGG   Desulfobulbus oligotrophicus: HP555_05385
Entry
HP555_05385       CDS       T06967                                 
Name
(GenBank) HD domain-containing protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
dog  Desulfobulbus oligotrophicus
Pathway
dog03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dog00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HP555_05385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dog03019]
    HP555_05385
Enzymes [BR:dog01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     HP555_05385
Messenger RNA biogenesis [BR:dog03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     HP555_05385
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: QQG65338
UniProt: A0A7T5VCG3
Position
1195128..1196660
AA seq 510 aa
MASVDAPVMPRLTGEQVLAVLPQEMKKALSALQQQFGGPLYLAGGVVRDLLRKHIPVDID
LTVAAGASIRAERLAELLGGTFVSLKQEEDTARVVYHNMTVDFSAYRQETATIVEDLRCR
DLTINALAIRLDTLLEASPELWPNPVVILDPSTGLADLQQGVLRVVHAESFSSDPLRLLR
VFRFAGTLGYTVEHETMDLVRRQCSMIATAAAERIAHELDLIMSGSRAYATVALMAECGL
LWHIIPDLATGIGMVQPESHHLDVWNHSLETLRQAERVLAEPDTFFPAAGEIMAAYLNSA
TRCLELKWAALLHDLGKPATHALQTDNGNRITFYRHDQVGSQMFDDLARGLRWSNEQRTR
VGRLIAEHMRPFHLANLARADGLTLRAAIRMIRKNEEQLPGLFVLAMADSLAGQGVGCIK
SMEAELAWLYRHLEKIRQLHIVPQKTVPPLLTGNDLIRELHLSPGPLFKRILDTVEERRM
TGEVTDRATALNLAKNLVDRQMSDRNVNEG
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggcgagtgtagacgcaccggtaatgccccggcttaccggggagcaggttcttgcagtc
ttgccgcaggagatgaaaaaagcgctgtcagcgttgcagcagcagtttggaggacctctg
tatctggccgggggagtggtgcgagatctgttgcgcaaacatatccctgtggatattgac
ctgacggtagccgcaggtgcgtccatccgggctgaacgtctggccgaactgcttggaggc
acttttgtatctctgaaacaggaagaagataccgcacgagttgtctaccacaacatgacg
gttgatttttccgcctatcgtcaggaaacagcgactattgttgaagatttaaggtgtcgg
gatttaacgatcaatgccctggcaatacgattggacacacttttggaagcatctcctgaa
ctgtggcccaaccctgttgtgatccttgatccctccaccggacttgccgatttgcagcaa
ggagtgctccgggtcgtacatgcagagagcttttccagtgatcctcttcggctgctgcgg
gtattccgctttgccggcaccctgggatataccgtggagcacgaaacaatggacctggta
cgccggcagtgctccatgatagcaacagctgccgcggaacgcattgcccatgagctggat
ctgatcatgtccggttcaagagcgtatgcaacggtggccctgatggcagagtgtggactg
ctctggcatattattccggacctggcgacaggtatcggtatggtgcaacctgaaagccat
catctcgatgtctggaaccacagcctggaaacacttcgtcaggcggaacgtgtgcttgct
gaaccagacaccttttttcctgcagcaggtgagatcatggcagcgtatctcaacagcgca
actcgttgcttagagctgaaatgggctgctctgctgcatgatctcggcaaaccagctacg
catgcgctgcagaccgacaacggaaatcgcatcaccttttaccggcatgatcaggtcggc
tcgcagatgtttgatgacctggctcgggggttacgatggagcaatgaacagagaacacgg
gtagggcgattgattgcggagcatatgcgtccatttcatcttgcaaaccttgcccgggcc
gatggattgactctacgggctgccatccgcatgattcgcaagaatgaagagcagcttccg
gggttgtttgttctggccatggctgatagtctggccgggcagggggtggggtgcatcaag
agtatggaggctgaactggcatggttgtaccggcatctggagaagattcggcaactgcac
attgttcctcagaaaacagttcctccgttactgacaggcaatgacctcatcagggaactg
catctcagtcccggcccactgtttaaacggattttggatacagttgaagaaagacgcatg
acaggcgaggtgacggacagagccactgccctcaatttggcaaaaaacctggtcgaccgt
cagatgtccgaccgtaacgtgaatgagggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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