KEGG   Dokdonia sp. MED134: MED134_04839
Entry
MED134_04839      CDS       T03275                                 
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase, alpha subunit
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
dok  Dokdonia sp. MED134
Pathway
dok00020  Citrate cycle (TCA cycle)
dok00640  Propanoate metabolism
dok00660  C5-Branched dibasic acid metabolism
dok01100  Metabolic pathways
dok01110  Biosynthesis of secondary metabolites
dok01120  Microbial metabolism in diverse environments
dok01200  Carbon metabolism
Module
dok_M00009  Citrate cycle (TCA cycle, Krebs cycle)
dok_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:dok00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    MED134_04839 (sucD)
   00640 Propanoate metabolism
    MED134_04839 (sucD)
   00660 C5-Branched dibasic acid metabolism
    MED134_04839 (sucD)
Enzymes [BR:dok01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     MED134_04839 (sucD)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2 IlvN GFO_IDH_MocA
Other DBs
NCBI-ProteinID: EAQ40051
Position
complement(567473..568345)
AA seq 290 aa
MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDYGTNVVGGVTPGKGGQVHLDKPVFNTVQEA
VEKVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKASDYIATKECRLI
GPNCPGVITPGEAKVGIMPGFVFKEGKVGIVSKSGTLTYEAADQVVKQGLGITTAIGIGG
DPIIGTTTKEAVELLINDPATEAVVMIGEIGGQLEGDAAKWYKESGSKKPVIGFIAGETA
PAGRTMGHAGAIVGGSDDTAQAKKAIMRECGIHVVDSPAEIGKKVAEVLG
NT seq 873 nt   +upstreamnt  +downstreamnt
atgagcgttttagtaaataaagattcaaaaataattgttcaaggatttacaggtagcgag
ggaactttccacgcgggccagatgatcgactatggaacaaatgtagtaggtggagttact
ccaggtaaaggaggacaagtacacctagataagcctgtttttaacacagtacaagaagct
gtagaaaaagtaggagcagacacaactattatttttgtaccgccagcatttgctgcagat
gcaattatggaagctgcagatgcaggtatcaaagtaattataacaattacagaaggtatc
cctgttgcagatatgatcaaagcatcagactatatcgctacaaaagagtgtcgccttata
ggacctaactgtccaggtgtaatcactccaggagaagcaaaagtaggtattatgccaggt
tttgtttttaaagaaggaaaagtaggtatcgtttcaaaatctggaacacttacttatgaa
gctgcagaccaggttgtaaaacaaggtcttggtatcacaacagctatcggtataggtggt
gacccaattatcgggacaactacaaaagaagctgtagagttacttataaatgacccagca
acagaagctgtcgtaatgataggtgagataggtggtcaactagaaggtgatgctgcaaag
tggtataaagaaagcggaagcaagaagccagttataggatttatagccggagagactgca
ccagcaggacgtacaatggggcacgcaggtgcaattgtaggtggatctgatgatacagct
caagctaaaaaagcaattatgagagaatgtggaatacacgtagtagattctccagcagaa
ataggtaagaaagtagcagaagttttaggctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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