KEGG   Desulfosudis oleivorans: Dole_2825
Entry
Dole_2825         CDS       T00610                                 
Name
(GenBank) electron transport complex, RnfABCDGE type, B subunit
  KO
K15022  formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
Organism
dol  Desulfosudis oleivorans
Pathway
dol00680  Methane metabolism
dol01100  Metabolic pathways
dol01120  Microbial metabolism in diverse environments
dol01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:dol00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    Dole_2825
Enzymes [BR:dol01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.10  formate dehydrogenase (NADP+)
     Dole_2825
SSDB
Motif
Pfam: Pyr_redox_2 Fer4_20 FeS Pyr_redox Pyr_redox_3 NAD_binding_8 Fer4 Fer4_21 Fer4_7 DAO Fer4_9 Fer4_6 FAD_oxidored HI0933_like Fer4_2 NAD_binding_7 AlaDh_PNT_C Fer4_10 FAD_binding_2 FAD_binding_3 GIDA Thi4 MurD-like_N Amino_oxidase Fer4_8 Fer4_3 NAD_binding_9
Other DBs
NCBI-ProteinID: ABW68628
UniProt: A8ZY01
Position
complement(3407431..3409530)
AA seq 699 aa
MLNAILSMLGLGMASSVILGVASRVFYVYEDPRIAEVESATAGANCGGCGYAGCSAAAAA
VVKGEALPSVCIVGGPDSAANIAAIMGVDPGTAEPRVSENECTGGNRAENKYNYKGILSC
NAVTALYGGRRDCPTGCLGYGDCIKACAFDAIVMGEDGYPVVDPAKCVGCGACEAVCPKN
IIRVKTMSQRLFEFNATNGAHAPCTQTCPAQIDIPKYINQIKTGDYEGAVNTIRERNPLL
LACGRVCPHPCEDKCRRGVVDEPVSINQLKRFAADYEMNSGKRLPISCAPSTGKKVAVIG
GGPAGLTAAYFLRRVGHGVTIFDDNPELGGMIRYGIPEYRLPKKVLKWETDGILNMGIEH
KPNMRLGRDFDMGSLMAAGYDAIFLGIGAWKDYGLKIEGNDLKGVYTGISFLTKFAAWQQ
GAGTDPVPVGRKCAVIGGGNTAIDCVRTLVRLGAEEVSIVYRRTRNEMPANMVEIEAAEH
EGVNMKYLFSPNRILGDENGNVVGLEVQEMELGEPDASGRRKPVPKEGAVQVLETDMIVL
AIGQGPDISFKETEKGRRGEALATTKWDTIDQIDPQTLQTNIPYIFTAGDSATGASLVVE
AIGGGRRAARSIDLYLSGQPVTPPPNDLFKTHIPGCLFETVDGVTKSKRVEMPELEVSSR
IKTFDEADLVISEENALKEADRCLFCCTTCYNREDGCKL
NT seq 2100 nt   +upstreamnt  +downstreamnt
gtgttaaatgcgattctttccatgttggggctgggcatggccagcagcgtcattctgggt
gttgcttcccgtgtgttttatgtttatgaagacccccgtatcgcagaggtcgaatcggca
accgccggcgccaactgcggcgggtgcggatatgccggctgttcagccgctgccgcggcg
gtggtgaagggagaggccctgcccagtgtctgtattgtgggtgggccggattccgcggcc
aatatcgccgccatcatgggagtggatccgggaaccgccgagcccagggtgtcggaaaac
gagtgcaccggcggcaaccgggcggaaaacaaatacaactacaagggaatcctttcctgc
aacgcggtcacggccctgtacggcggccggcgggactgccccaccggatgcctgggatac
ggtgactgcattaaagcctgcgcctttgacgccatcgtgatgggcgaagacggctacccg
gtggtggacccggccaagtgcgtggggtgtggggcctgtgaggcggtctgtccgaagaac
atcattcgggtcaaaaccatgtcccagcggctctttgagttcaatgccaccaacggagcc
catgcgccgtgcacccagacctgtccggcccagatcgatattcccaagtacatcaaccag
atcaaaaccggcgactatgagggcgcggtcaacaccattcgggagagaaacccgttgctg
ctggcctgcggccgggtctgcccccatccctgcgaggacaagtgccgccgcggggtggtg
gatgagccggtctccatcaaccagctcaagcggtttgcggctgactatgagatgaactcc
ggcaagcggctgcccatttcctgcgcgccgtccaccggcaagaaggtagcggtgatcggc
ggcggcccggccggcctgaccgccgcctattttctgcgccgggtgggacacggcgtgacc
atttttgacgacaacccggagctgggcggcatgatccgttacggtattcccgaataccgg
ctgcccaaaaaagtgctgaagtgggagaccgacggcattctcaacatgggcatcgagcac
aagcccaacatgcggctgggccgtgattttgacatgggcagcctgatggccgccgggtac
gacgccattttcctgggcatcggcgcatggaaggattacggtcttaagattgaaggcaac
gacctcaagggtgtttacaccggcatatcctttctcaccaaatttgccgcatggcagcag
ggcgccggcacggacccggtgccggtgggcagaaagtgcgccgtcatcggcggcggcaac
acggccattgactgcgtccggaccctggtgcggctgggcgctgaagaggtctccattgtc
tatcgccggacccggaacgagatgccggccaacatggtggagatcgaggcggccgagcat
gaaggggtcaacatgaaatacctgttctcccccaaccgcattctcggggatgagaatggt
aacgtagtgggcctggaggtccaggagatggaactgggcgagccggacgccagcggccgc
cgtaaacccgtacccaaggagggcgcggtccaggtgctggagaccgacatgattgtgctg
gccatcggccagggacccgacatctcctttaaagagacggaaaagggccggcggggtgag
gccctggccaccaccaagtgggacaccatcgaccagattgacccccagacccttcagacc
aatattccgtatatttttaccgccggcgattcggcaaccggcgcctccctggtggtggaa
gccatcggcgggggccgccgcgcggcccgctccattgatctttacctctccggccagccg
gtgacaccgccgcccaacgacctgttcaagacccatattcccgggtgcctgtttgagaca
gtggacggggtcacaaagagcaagcgggtggagatgccggagctggaggtgagcagccgg
atcaagacctttgacgaggccgacctggtcatcagcgaggagaatgccctgaaggaggcg
gaccggtgcctcttctgctgcacgacctgctacaaccgggaggacggctgcaagctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (62)   

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