KEGG   Desulfosporosinus orientis: Desor_0020
Entry
Desor_0020        CDS       T01675                                 
Name
(GenBank) DNA polymerase III, subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
dor  Desulfosporosinus orientis
Pathway
dor03030  DNA replication
dor03430  Mismatch repair
dor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Desor_0020
   03430 Mismatch repair
    Desor_0020
   03440 Homologous recombination
    Desor_0020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dor03032]
    Desor_0020
   03400 DNA repair and recombination proteins [BR:dor03400]
    Desor_0020
Enzymes [BR:dor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Desor_0020
DNA replication proteins [BR:dor03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Desor_0020
DNA repair and recombination proteins [BR:dor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Desor_0020
SSDB
Motif
Pfam: DNA_pol3_delta2 DnaX_C DNA_pol3_gamma3 AAA RuvB_N AAA_22 TIP49 AAA_30 AAA_5 ResIII AAA_19 AAA_14 Rad17 AAA_16 AAA_18 AAA_24 DUF815 AAA_7 Mg_chelatase DNA_pol3_delta_C AAA_28 T2SSE PIF1 AAA_2 RNA_helicase nSTAND3 SKI AAA_6 DNA_pol3_delta TsaE AAA_assoc_2
Other DBs
NCBI-ProteinID: AET65778
UniProt: G7W7A7
Position
16744..18414
AA seq 556 aa
MAYLALYREWRPKLFRDIVGQEHIKKTFLNALRQGKVAHAYLFSGPRGTGKTSTAKILAK
ALNCEHRDDEEPCNFCPSCMSIDQGSAMEVFEIDAASNRGINEIRDLRDNIKLSSIEGKH
KVYIIDEVHMLTTEAFNALLKTLEEPPPQVVFILATTEVQKIPLTILSRVQRFEFHRISA
EDIQQRLAEVCNSLQREVHSDALMVIAQKSEGGLRDALSILDQCLLQSDPVGVEEVYQVL
GMVGETYSAQLVDKIISKDYAKSLGFLAEGIQQGRDPRQIIRELLEYLRQMLLASTAGTT
PMVLPHIQDQLLKQCKQVGISEILRWISILLQGEGQLKYASNARLAAELLLVQTIHESQP
ASIHGQEEILTRLSVIEQTIKSNTVLSKNVHEKKIPGNSKLNGETNQTVVLKRVNSGDPI
ISDNTASEKKTDKILSLDIIQARWNEVMDEVKKRKKSTQAFLMEGKPVELGGNTLVIVFR
EGCSFHRDKVNQTENRETIEEVLKQIFGSSLILQNYMENEFKTGKDPQKEDPDNQEQGLI
KKAKEMFGSDLVVVRE
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgtatctcgcattatatcgtgaatggcgtccaaaattatttcgagacatagtagga
caagaacatataaaaaagacgttcctgaatgccttaagacaagggaaggtcgcccatgct
tatctatttagtggtccaagaggtactggtaaaacctctaccgctaaaattttagcaaag
gctttaaattgtgagcatagggatgatgaagagccttgtaatttttgtccttcttgtatg
agtattgatcaaggttcagctatggaggttttcgagattgatgcagcatcaaaccggggc
atcaatgaaattagggacctaagagataatataaagttgagctcaatagaaggaaagcat
aaagtttatattattgatgaagtacatatgttgacgacagaagcttttaatgccttgctc
aaaaccttggaagagccaccgcctcaggttgttttcatacttgcgacaacagaagttcag
aaaatacctttaacaattctttcccgtgtacagcggtttgaatttcatagaatatctgcg
gaagatattcaacagagacttgcggaagtgtgtaactctttacaaagggaagttcattca
gatgctctgatggttattgctcagaaatcagagggagggctaagagatgctttaagtatt
ctagaccaatgtctcttgcagagtgatccagtcggggttgaagaggtatatcaagtattg
ggaatggttggagagacctatagtgctcaactggttgataaaattatttccaaggattat
gcaaaatccttaggctttttggctgaggggatacaacaagggcgagatcctcgacagatc
attagagaactcttagaatatttacgtcagatgctattagcttcaacggcaggaacaact
cctatggttttacctcacattcaagatcaattgctcaaacagtgcaaacaggttggaatc
tcagagattttacgctggatttctatcctcctgcagggagaaggccagcttaaatatgcg
tcgaatgctcggttagctgctgaactcttattagtgcaaactatacatgaaagtcagcct
gccagtattcatggacaggaggagattctcactcgtttatctgttatcgaacagactatc
aaatcgaatactgtactaagtaagaatgttcatgaaaagaagattcctgggaactctaaa
ttaaatggagagacaaatcaaactgttgtactaaaaagagtaaattccggagatcctata
atttcagataatacagcgtcagaaaagaaaacggataagatcttaagcctagacattatc
caagcacgctggaatgaagttatggatgaagttaaaaaacgaaaaaaatcaactcaagct
ttcttaatggaaggaaaaccagttgagctagggggtaataccttagttatagtttttagg
gaaggttgttcttttcatagggataaagttaatcagactgagaatcgagagactatcgaa
gaagtactaaagcagatatttgggtcctctttgatccttcaaaactatatggagaacgaa
tttaagacgggaaaagatcctcaaaaggaagatcccgataatcaagagcaaggcctgatt
aagaaagctaaagaaatgtttggctccgatcttgtagtggtaagagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (58)   

Download RDF
DBGET integrated database retrieval system