KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0184900-01
Entry
Os01t0184900-01   CDS       T02163                                 
Symbol
Os01g0184900
Name
(RAP-DB) Similar to SSRP1 protein.
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dosa03000]
    Os01t0184900-01 (Os01g0184900)
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os01t0184900-01 (Os01g0184900)
Transcription factors [BR:dosa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    Os01t0184900-01 (Os01g0184900)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     Os01t0184900-01 (Os01g0184900)
SSDB
Motif
Pfam: PH1_SSRP1-like POB3_N SSrecog Rttp106-like_middle HMG_box HMG_box_2 HMG_box_5 CDC45
Other DBs
RAP-DB: Os01t0184900-01
Position
chr01:join(4497923..4497976,4498719..4498904,4499898..4500003,4500080..4500216,4500341..4500424,4500498..4500589,4500729..4500837,4500944..4501030,4501153..4501245,4502144..4502341,4502481..4502632,4502724..4502874,4502975..4503073,4503159..4503326,4503624..4503702,4503870..4504000)
AA seq 641 aa
MTDGHLFNNILLGGRAGSNPGQFKVYSGGLAWKRQGGGKTIEIEKSDLTSVTWMKVPRAY
QLGVRTKDGLFYKFIGFREQDVSSLTNFMQKNMGLSPDEKQLSVSGQNWGGIDINGNMLT
FMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFL
GDENRTAAQVLWETIMGVADVDSSEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNLALTK
EVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI
QRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDEES
DEEDEDFVADKDDSGSPTDDSGGEDSDASESGGEKEKLSKKEASSSKPPVKRKPKGRDEE
GSDKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKMTGE
EKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgacggacggccatctcttcaacaacatcctcctcggcggccgcgccggctcgaatcct
ggccagtttaaagtgtattctggaggtcttgcatggaagagacagggtggaggaaagacc
attgagattgagaaatctgatttaacgtcggtgacatggatgaaagtccccagggcctat
cagcttggagtcaggaccaaagatggcctgttttacaagtttattggcttccgtgaacag
gatgtaagcagtctgaccaatttcatgcaaaagaatatgggcctctcaccagatgaaaaa
cagctttctgttagtggtcaaaactggggagggatcgatataaatggaaatatgcttacc
tttatggttggttcaaagcaagcatttgaagtgtcgctggcagatgtctcacaaacacaa
atgcaaggcaaaacagatgttctcttagagtttcatgttgatgatactactgggggcaat
gagaaagattcgcttatggatttaagctttcatgtacctacttcaaatactcagtttctt
ggagatgagaatcgcactgcagcccaggtcctatgggaaacaataatgggtgttgctgat
gttgattcttctgaagaggcagttgtcacctttgaaggaattgctattcttacaccaaga
ggacgttatagtgttgagcttcatctgtcatttttgcgtctccaaggacaagctaatgat
tttaaaatccaatatagcagcattgttcgcctttttcttttgccaaagtcaaacaaccct
catacatttgtggttgtcactcttgatccaccaatccgtaaaggacaaacactgtatcct
cacattgtcattcagtttgagacagaggcagtagttgaaagaaatctggcattaactaaa
gaggttctggctgaaaaatacaaggacaggctggaggaatcttacaagggtctgatacat
gaggtattcaccaaagttcttcgtggtctatctggtgctaaagttacaaggccaggttct
ttcagaagttgccaagatgggtatgcagttaaatcgtctctcaaagctgaagatggactg
ttgtatccacttgaaaagggcttcttctttctgccaaagcctcccaccctcattctacat
gaagagattgagtttgttgaatttgaacgtcatggtgctgggggtgccagtatttcatca
cactatttcgacctcctagtcaagctgaaaaatgatcaagaacatctcttcagaaatatt
caaaggagtgaataccataacctcttcaactttatcaatggaaaacacttgaaaataatg
aaccttggagatggtcaaggcgcaactggtggggttacagctgttctacgagacactgat
gatgatgctgttgatccacatctagaacgaattaaaaatcaggctggggatgaggaaagt
gatgaagaggatgaagattttgttgcggataaggatgatagtggatcacctactgatgat
tctggtggggaggattcagatgctagtgaaagtgggggtgaaaaagagaaattatccaaa
aaggaagctagtagttcaaagccacctgtgaagaggaagcctaagggaagggatgaagaa
ggttcagacaaaagaaagccgaagaagaaaaaggatcctaatgcccccaaaagagcaatg
acaccattcatgtacttctcaatggctgagcgaggaaatatgaagaataacaatcctgat
ttgcctacaaccgagattgcaaagaagctcggggagatgtggcaaaagatgacaggcgaa
gagaagcaaccttacatccaacagtctcaagtcgacaagaaacgatacgagaaggaatct
gctgtctaccgtggcgcagccgccatggacgtggactctggctccggcggcaacgagtct
gactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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