KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0363900-01
Entry
Os01t0363900-01   CDS       T02163                                 
Symbol
Os01g0363900
Name
(RAP-DB) Similar to HASTY.
  KO
K14289  exportin-5
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Os01t0363900-01 (Os01g0363900)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dosa03016]
    Os01t0363900-01 (Os01g0363900)
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os01t0363900-01 (Os01g0363900)
Transfer RNA biogenesis [BR:dosa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    Os01t0363900-01 (Os01g0363900)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     Os01t0363900-01 (Os01g0363900)
SSDB
Motif
Pfam: Exportin-5 Xpo1 CCSMST1
Other DBs
RAP-DB: Os01t0363900-01
Position
chr01:join(14809963..14810070,14810780..14810881,14811778..14811921,14812027..14812107,14812199..14812268,14812388..14812458,14812548..14812711,14812790..14812861,14812958..14813195,14813570..14813632,14813715..14813990,14814979..14815092,14815220..14815346,14815436..14815605,14815864..14815962,14818862..14818965,14819073..14819370,14819498..14819730,14819967..14820467,14820543..14820837,14821110..14821293,14821703..14821785)
AA seq 1198 aa
MAADPAVASAVAAISAVMDWRSSPDARSAAFAYLESVKTGDVRALANTSFLLVRKDQSSE
VRLHGFKMLQHLVRLRWEELSVAERNEFANLTVNLIPEVVGPHEEWALKSQTAALVAEVV
RREGVALWNTLLPSIVSLSNNGPIEAELVAMILRWLPEDITVHNEDLEGDRRRALLRGLT
ESLPQILPLLYSLLEKHFVAALSAHTNQQMELAKQHVGTITAVLNAANAYAEWAPVTDLA
KYGLIHGCGSLFSYSDFRLHACEFFKIICQRKRPLDVAIVEYDAAMSNIFQLLMNIAQDF
LVRSKMQPNVIDVNEYEFAMCICETMVALGSSNMQCILADVARTLHFLQQMLEYYQHYKI
TLHFQSLLFWLVVLREPSKAKSVARVSSDTPAAGNSASTGGGSTEREKKGVSVLITDEMY
STILDVTFKRMLKKSTSASSGLLELWSEELEGKSDFCNYRAKLLDLIKVIASQRPGITAT
SIVQRINIVFGDANEATKSSQDLDAMEGAQLGLEAVVSAIFDGSSDYSKIDQDTKFQIHR
IFEGLLQQLLSLKWSQPNLAVIHGHYLDSLGPFLRHYPDAVACIVNKLFEILTSLPITIQ
DPSNNFRQARLQICSSFIRISRAADKALLPHMKNIADTMAYLQGEGRLLRAEHNHLCEAF
LVMASSAGIQQQQEVLAWLLEPINKMWTQVEWQNAYLSDPSGLTHMFADSQFMWSIYHNI
TLFEKALKRGGSKKSASAPQALATTVVTANLHPMCSHLPWILPPLLRLLRCIHMLWAEPF
SQSLAGEVKAAKSMTVAEQTSLLGETNKLTKGQVASADGLLDVQREGESKENTIRNWLRG
IRDSGYNVIGLSASLGDPFFRCIEGSSITAALMENVQAMEFRHLRQLIHLVIIPLVKYCP
PELWRMWISNLLQPLFVHCQQALDFSWSSLLREGRAKVPDNFGNLSGSDLKVEVMEEKLL
RDLTREVCSVLWVLASPGLNSGLPSLEQLGPANRINSSLKDLELFVSSSITGFLMLNVST
AVPALRITVEVFSWTDSEAVTKIIPFCGALIHLAVATNRAELSQFVAKDLFSSILHGLSV
ELNSITSSELVGLCREIYIYLSDRDPAPRQVLLSLPHMKQEDLLAFDESLSKTASPKDQK
LLMRSLLLLASGNKLRALVGQKATNVITNVTTRNRSSAARHGLSAEEDDHIGLAALSS
NT seq 3597 nt   +upstreamnt  +downstreamnt
atggcggccgaccccgccgtagcgtccgccgtggcggcgatctccgccgtgatggactgg
cgctcctcccccgacgcccgctccgccgccttcgcgtacctcgaatcggttaagacagga
gatgtccgggcattggcgaacacatcatttttattggtccgaaaggaccagtcttcagag
gtccgactgcatggtttcaaaatgttgcagcacttggtgagattgagatgggaggaactc
agtgttgcagaacgaaatgaatttgctaatttgactgttaatttgatacctgaggttgtt
ggtcctcatgaggagtgggctttgaagagtcaaacggctgcattagtagcagaggtagtt
agaagggagggagttgctttgtggaatactttactcccatctattgtttcgttgtcaaac
aatggtcctattgaggctgagttagttgccatgattctgaggtggcttccagaggatatc
actgttcacaatgaggatttagaaggtgatagacgtagggcattgttacgtggtcttact
gagtcgttgccacaaatcctgccgctgttatattctctacttgagaaacactttgtagct
gctttgagcgcgcacacgaatcagcaaatggagttggctaaacaacatgttgggacaata
actgctgtgctgaatgctgccaatgcatatgctgaatgggctcctgtgacagatctcgcc
aaatatggtttaattcatggatgtggatccttgttttcttacagtgattttcgtctccat
gcttgtgaattctttaaaattatatgccagaggaaacggcctttggatgtcgcgattgtg
gagtatgatgcagcaatgagcaacattttccagttgttgatgaacattgcacaagatttt
ttagtgagatccaagatgcagcccaacgttattgatgttaatgaatacgagtttgcaatg
tgtatttgtgagacaatggttgctctcggttcttctaatatgcagtgcatactagctgat
gtagcaaggactttgcacttcctacaacagatgctggaatattatcaacactacaagatc
acgcttcatttccaatctttattattttggctggtggtcttgagagaaccatcaaaagct
aagtctgttgcacgtgtttctagtgacacccctgctgccggtaattctgcatctactggt
ggtggttcaactgaaagggagaagaaaggggtgtcagtattaatcactgatgaaatgtac
agtacaattttggatgttacgttcaaaagaatgcttaaaaaaagtacgagtgcatcttca
gggctgttagaactatggagtgaagagctagaggggaagagtgacttctgcaactaccgt
gccaagctgctggatctcataaaagtcattgcatctcaaaggcctggtattacagcaaca
agcattgtacagagaataaacattgtatttggagatgctaatgaagcaacgaaatcatcc
caggatcttgatgcaatggaaggtgcgcagctggggctggaagcagttgttagtgctata
ttcgatggctcatctgattattcaaagattgaccaggacacaaaattccaaattcacagg
atctttgaaggcttacttcagcagcttctttctttaaagtggtcacaaccaaatcttgct
gttattcatggtcactatttggattctttgggtcctttcttgagacattacccagatgca
gttgcctgtattgtgaataagctttttgaaatattaacatctctccccatcacaattcag
gacccttcaaataatttccgtcaagctagactgcagatctgctcatcattcattcgtata
tcaagagctgctgataaagcacttctgcctcacatgaagaacattgctgatacaatggct
tatcttcaaggagagggtcgcttactacgtgctgagcataaccacctctgtgaagcgttt
cttgtcatggcatcctctgcagggattcaacagcaacaggaagtcctggcttggttacta
gaacctatcaacaaaatgtggacgcaagtggaatggcaaaatgcatacttgtctgaccca
tctggcttgacacacatgtttgctgacagccaatttatgtggtcaatttatcacaacatc
acattatttgagaaggcactcaagaggggtgggtccaaaaaatctgcatcagctccacaa
gcactggccacaacagtggtaactgctaatctgcatccaatgtgttcacatctaccatgg
attctgccccctctgttaaggctgttgcgatgcatacatatgctttgggccgagcccttt
tctcagtctctggcaggagaagtcaaagcggcaaaaagcatgactgtggcggagcagacc
agccttcttggggagacaaataaactcaccaaaggccaggttgcatctgctgatggattg
ttggatgttcaaagggagggagagtctaaggaaaacaccataaggaactggttacgcggg
atccgtgacagtgggtacaatgttataggactatcggctagtcttggggatccatttttc
cgatgcatagagggttcctccatcactgctgctcttatggagaacgtgcaagctatggaa
tttcggcatttgcgccaacttatccaccttgttattattcctttggttaaatattgccct
cctgaactgtggcggatgtggatatcgaaccttttacagccattatttgtccattgtcag
caagctcttgatttctcttggtccagtcttcttcgtgagggccgggctaaggttcctgat
aattttggtaatctttctgggtcagatctgaaggtagaggtaatggaagagaaattgctt
agagacttgactcgtgaagtatgttccgttctttgggttttagcatcaccaggcttgaat
agtggtcttccatccttagaacaacttggacctgccaaccggattaattcttctcttaag
gatctggagttgtttgtttccagctctatcactggatttcttatgcttaatgtctccact
gctgttcctgcattgaggataactgttgaagtgttcagttggacagatagtgaagcagtc
acaaaaattattcctttttgtggtgcattgattcaccttgctgttgcaacaaatcgggct
gagttgagtcagtttgttgcgaaagatctattttcttccatattacatggcttatctgtt
gagttgaattccattacgagttcagaacttgttggactttgtcgagaaatatatatctat
ctctcagatagagatcccgcacctagacaggttcttctgtccctcccacacatgaagcag
gaagatttgctagcctttgatgagtctttgagcaaaactgcaagtccaaaagatcaaaag
ctacttatgcgaagcttacttttgcttgcttcagggaacaaattgagagctcttgttggt
caaaaggctactaatgttattaccaacgttacaactcgaaaccggagctctgctgcacgc
catggacttagtgctgaggaagatgaccacattggattagctgcactatcatcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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