KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0510800-01
Entry
Os01t0510800-01   CDS       T02163                                 
Symbol
Os01g0510800
Name
(RAP-DB) Histone-fold domain containing protein.
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Os01t0510800-01 (Os01g0510800)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os01t0510800-01 (Os01g0510800)
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os01t0510800-01 (Os01g0510800)
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     Os01t0510800-01 (Os01g0510800)
   Coactivators
    SAGA/TFTC/STAGA complex
     Os01t0510800-01 (Os01g0510800)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     Os01t0510800-01 (Os01g0510800)
    STAGA complex
     Os01t0510800-01 (Os01g0510800)
    TFTC complex
     Os01t0510800-01 (Os01g0510800)
    SAGA complex
     Os01t0510800-01 (Os01g0510800)
    SLIK complex
     Os01t0510800-01 (Os01g0510800)
SSDB
Motif
Pfam: TAF6_C TAF Histone TFIID-31kDa CBFD_NFYB_HMF
Other DBs
RAP-DB: Os01t0510800-01
Position
chr01:complement(join(17968145..17968270,17966908..17966994,17965414..17965515,17965209..17965317,17964585..17964691,17964375..17964512,17964205..17964300,17963960..17964084,17962090..17962222,17961892..17962017,17961701..17961812,17961167..17961531))
AA seq 541 aa
MSIVPKETIEVIGQSVGIANLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD
VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV
VAHWLAIEGVQPAIPENPPVDAIVAPTENKRTEHGKDDGLPVDIKLPVKHVLSRELQMYF
DKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRSLGDLPVLFALMRV
VQSLLHNPHIHIEPYLHQLMPSIITCMVAKRLGHRLSDNHWELRDFSANLVGSVCRRFGH
AYHNIQTRVTRTLVQGFLDPQKSLTQHYGAIQGISALGPSAIRLLLLPNLETYMQLLEPE
LQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRPLLRSNKRVVTNNP
NKRKSSTDLSTSQPPLKKMTTDGAMNSMTSAPMPGTMDGFSTQLPNPSMTQTSSSGQLVE
STASGVIRRDQGSNHTQRVSTVLRLAWKEDQNAGHLLSSLYEVFGEAIFSFVQPPEISFF
L
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgagcatagtgcccaaagagacgattgaggtgatcgggcagagcgtcggcatcgccaac
ctccccgccgatgtctccgccgcgctcgcccccgacgtggagtaccgcctccgcgagatc
atgcaggaggccatcaagtgtatgcggcatgcaaagaggacagtcctgactgccgatgat
gttgatagtgctctcagcctcaggaatgttgagcctgtatatggatttgcttccggtgac
cccttgcggtttaagagagctgtgggacacaaggatctcttctatattgatgacagggag
gtagacttcaaagagattattgaggcccctctacctaaagctcctcttgatacagcagtt
gtagctcactggctagccattgagggagtccagcctgcaattccagagaatcctcctgta
gatgctatcgtagcaccaacagagaataaaaggacagagcatgggaaagatgatggactt
cctgttgacatcaagcttcctgttaagcatgtgttatctagagaactccagatgtatttt
gataaaatagcagagcttacaatgagtagatctgaaacctcagtttttagagaagcatta
gtgagcttatcaagagactcaggccttcatccgttggttccttacttttcctacttcatc
gccgatgaggttacccggagtttaggtgatcttcctgttttatttgctctcatgcgtgta
gtccaaagcctcctacacaatccccacattcatattgaaccatatttgcatcagttgatg
ccgtcaattatcacctgcatggttgcgaaaaggcttgggcataggctttcagacaaccat
tgggagcttagagacttctctgctaatttggttggttcagtatgtcgaaggtttggtcat
gcgtatcacaacatccaaacccgggtgacaaggacgttggtccagggatttcttgatcct
cagaaatcattgacacaacactatggtgcgattcaagggatatctgcattggggcccagt
gcaattaggcttctgcttttgcccaacctcgagacatacatgcagcttttagagccggaa
ttacaacttgataagcagaaaaatgagatgaaaagaaaggaagcatggcgtgtttatggt
gccctgctgtgtgctgcaggaaaatgcttatatgatcggctcaagttgtttcctaatttg
ctttctccatcaacacggcctcttttgaggagtaataagagagtcgtgactaacaaccca
aataaacggaagtctagtacagatctctccacatcccagccacctctgaagaagatgaca
acagatggtgcgatgaattctatgacttcagctcccatgccaggaaccatggatggcttc
tccacccaattacccaaccctagcatgacgcaaacttcatcctctgggcaattggtggaa
agcaccgcatcaggtgtgattcggagggatcagggaagcaaccacacgcaaagagtttcc
acagtgctgaggctagcctggaaggaggaccaaaatgctgggcatctgttgagttcattg
tacgaggtattcggtgaagccatcttctcctttgttcaaccaccagagatatcgttcttt
ttgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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