KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0635400-01
Entry
Os01t0635400-01   CDS       T02163                                 
Symbol
Os01g0635400
Name
(RAP-DB) Similar to mRNA-associated protein mrnp 41 (Rae1 protein homolog).
  KO
K14298  mRNA export factor
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Os01t0635400-01 (Os01g0635400)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os01t0635400-01 (Os01g0635400)
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os01t0635400-01 (Os01g0635400)
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Os01t0635400-01 (Os01g0635400)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    Os01t0635400-01 (Os01g0635400)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
RAP-DB: Os01t0635400-01
Position
chr01:join(25466460..25466519,25466641..25466727,25466851..25466919,25467035..25467228,25467521..25467662,25468403..25468483,25469260..25469388,25469700..25469777,25472393..25472464,25473536..25473616,25473897..25473938)
AA seq 344 aa
MASFTAGGGGANNNPNKSLEVNPAPGDSVSSLSFSPKANHLVATSWDNQVRCWEIQPGGQ
CQAKASISHDQPVLCSAWKDDGTTVFSGGCDKQIKMWPLLSGGQPMVLSGHEAPVKELAW
IPQMNLLVSGSWDKTLRYWDVRQPQPAHVQQLPERCYALSLSYPLMVVGTADRNVIVFNM
QNPQAEFKRIVSPLKLQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDGQQGKNFTFKCHRD
GNDIYAVNALNFHPVHHTFATSGSDGGFNFWDKDSKQRLKAFNKCPSPITCSTFNQDGSI
FAYAVCYDWSKGAEKHNPSTAKTNIFLHSVQESEVKGKPRVNKK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggcgagctttaccgccggcggcggcggcgccaacaacaaccccaacaagtccctcgag
gtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcgaaccac
ctcgtcgccacatcatgggacaaccaggttcgttgctgggagatccagcctggaggccaa
tgccaagcgaaggcctcgatctcgcacgatcagccggtgctgtgctcggcatggaaggat
gatgggactactgttttttcgggaggttgtgataaacagattaagatgtggccgctgctc
tccggtgggcagcccatggttttatcagggcatgaagcaccggtcaaagagcttgcctgg
ataccacagatgaaccttcttgttagtgggagctgggacaagactctgaggtactgggat
gttcgacaacctcagccagcacatgttcagcaactacctgagcgctgttatgctctctca
cttagttatcctctcatggtggttggcactgctgatcgaaatgtaatagtcttcaatatg
cagaatccacaggctgaattcaagaggattgtgtcacctttaaaactccagacaaggtgt
cttgctgcatttcctgatcagcaagggtttctggttggatcgatagaaggacgagttggt
gttcatcatgttgatgatggtcaacaagggaaaaactttacatttaaatgtcaccgtgat
ggcaatgacatatacgctgttaacgcattgaactttcaccctgtgcaccatacttttgcc
acttcgggctctgatggaggtttcaacttttgggacaaggacagtaagcaaaggcttaag
gctttcaataagtgtccgtcacccatcacatgcagtacattcaatcaggatggctcaata
tttgcttatgcggtatgctatgattggagcaagggtgccgagaagcacaatccttctact
gcaaaaacaaatatctttctccatagtgtccaggaatctgaggtcaaaggaaagccccgt
gttaataagaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system