KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0133000-00
Entry
Os02t0133000-00   CDS       T02163                                 
Symbol
Os02g0133000
Name
(RAP-DB) Cyclin-T1-1.
  KO
K15188  cyclin T
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Os02t0133000-00 (Os02g0133000)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os02t0133000-00 (Os02g0133000)
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     Os02t0133000-00 (Os02g0133000)
    Brd4/P-TEFb complex
     Os02t0133000-00 (Os02g0133000)
    7SK RNP complex
     Os02t0133000-00 (Os02g0133000)
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C TFIIB Cyclin_C
Other DBs
RAP-DB: Os02t0133000-00
Position
chr02:complement(join(1737307..1737461,1737039..1737120,1735719..1735853,1735458..1735633,1735219..1735367,1734447..1735090))
AA seq 446 aa
MGEGAAGSWYVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATA
TLLCHRFYLRQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVIIVAYETMYRKDCNAAHR
IYQKEVLEKQKELILVGETLLLSTIRFDFNIQHPYEPLKLALKKLGIFQMEVKQVAVNLI
NDAIRTTLVVQFKPHYIAAGSLYLAAKFNNFRLPSDGKVWWHEFDVAPKQLQAVIQQMTE
LFMGRNPCSMGPAIRPPPTPSLMERQQVIRPPPTPTLMERQPIIRPLPTPTLMENQHITH
SLGAVMRHTHSSIRSLSNNFDREASRSLPLNIPANRKSTVCPARNEGNQSLRMHMGHSNG
SDARFEKQYSRGALKADHVYHVVSGQKDLHVTGIRDLVRQKRTFHEVGEHPAPIDKSDTK
SWIRKRHGRNVIVFDTKSSSWKKQKL
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgggggagggcgcggcggggtcgtggtacgtcacgagggatgaggtcgagaggggttcg
ccgtcgaggagggacggcgtcggcgccgccaaggaggccgagctccgggcgacctactgc
tccttcatccgcgacgtcggcctcaggctgcagctgcctcaggtgacaatcgcgacggca
accttgctctgccatcgcttttatctccgacagtctcacgccaagaacgagtggcagacc
gttgcaactgtctgcgtatttcttgcttcgaagattgaagacacaccttgcccattacaa
cgtgtcatcattgtggcatatgaaaccatgtaccggaaagactgtaacgctgctcacaga
atctaccagaaggaagttcttgagaagcagaaagagctcattttggtaggggagacgctg
ttgctttcaacaattaggtttgatttcaacatacagcatccttacgagccactaaagctc
gctctcaagaagctgggcattttccagatggaagtgaaacaagttgcggtgaatctaata
aatgatgcgattcggactactttggttgtgcagtttaaacctcactacatagcagcaggg
tccctctaccttgctgctaagtttaataattttagacttccttctgatggaaaagtatgg
tggcatgagtttgatgttgctccaaagcagttacaagctgttatccaacaaatgacagag
ctatttatgggaagaaacccatgctccatgggtcctgccatcaggccaccgccaactcca
agtctgatggagagacagcaggtgatcaggccaccaccaactccaactctgatggagaga
cagccgataatcaggccactgccaactccaactctgatggagaatcagcacataacacac
tctttgggcgctgttatgaggcatacgcactcttcaataagaagtctaagcaataacttt
gatagagaggcttctaggtctttgcctttgaacattccagctaatcgcaaatcaactgtt
tgcccagcaaggaatgaaggcaatcagtcactgcgaatgcatatgggtcatagcaatggc
agtgatgcaaggtttgagaaacaatattcccggggagctctgaaagcagatcatgtttac
catgttgtcagcggacagaaggatcttcatgtgacaggaatcagggacttggttaggcag
aagagaacattccatgaagttggagagcatccagctcctattgataaatctgacactaag
tcctggatcaggaagcgacatggaagaaatgtgatagtttttgacactaagtcatcatct
tggaagaaacagaagctgtga

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