KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0227400-01
Entry
Os02t0227400-01   CDS       T02163                                 
Symbol
Os02g0227400
Name
(RAP-DB) Poly(A) polymerase, RNA-binding region domain containing protein.
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Os02t0227400-01 (Os02g0227400)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os02t0227400-01 (Os02g0227400)
Enzymes [BR:dosa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     Os02t0227400-01 (Os02g0227400)
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     Os02t0227400-01 (Os02g0227400)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Nrap_D2
Other DBs
RAP-DB: Os02t0227400-01
Position
chr02:join(7145012..7145152,7145270..7145347,7145821..7145928,7147070..7147132,7147213..7147374,7147801..7147914,7147993..7148055,7148168..7148500,7148579..7148743,7148892..7149497)
AA seq 610 aa
MAGSFVAVRGKPRSSPKRSGGGGGADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEE
SAKREEVLREIDQIVKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDAL
CIGPSYVKREEEFFVMLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLP
VIPPDFDISQGSVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGV
YSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNL
GFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNK
ASWSSLFEPFQFFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQC
HPNPCEYADPSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMD
LAVTHVRKKEIPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYH
SVGGADVDSFKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSEGSTVSGNSCAAV
GTIGLVDETS
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggcgggatctttcgtcgcggtcagggggaagcctcggtcgtccccgaagcggagcggc
ggcggcggcggcgcggatccgcccttgtctctggccatgccgaccgtcgccgatctccac
aagacggctgagttggagaagttcttggttgaagccggcctttatgaaggggaggaggag
tccgcgaaacgggaggaggttcttcgggagattgatcagatagtcaaggaatgggtgaag
aaggtcactattcagaaaggatatagtgagcaaatggttaaagaggcaaatgcagtcctt
ttcacttttggatcttacagactgggggttcatgggcctggagcagacattgatgcacta
tgtattggaccctcatatgtgaaacgagaggaggaattttttgtcatgctatatggcgca
ttatcagaaatggaagaagtgactgaactgcaacctgtacctgatgctcatgtaccagtt
atgaaattcaagtttcgtgggctaccaattgaccttctctatgccagtgtatctcttcca
gtaataccaccagattttgacatctctcaaggatctgtactttgtgatgttgatgaagca
actgttcgaagtctcaatgggtgcagggtggcagaccagattcttcgacttgttccaaat
gcggagatcttccggaaaacactcagatgtttgaagtactgggcacagagaagaggagtt
tattctaatgttactggtttgctggggggtgtcagctgggccctattggttgctcgtgtc
tgccaactttatcccaatgctgtgccaagtatgctggtttcaagattcttcagagttttc
acccagtggcagtggccaaatcctgtgatgctttgtgccattgagaacgatgataacctt
ggctttgctgtgtgggatccacgtaagaatcctcgtgatagatcacatgttatgcctatc
atcacgccagcatatccatgcatgaactctagttacaatgtttcaactagcacattgagg
gttattatggagcaatttcagtttggtaataagatttgtcaggaaattgagcttaacaag
gctagctggagttctttgtttgagcctttccaatttttcgaggcatatacaagatatcta
gtggttgacattgttgcagatgatgatgatgatcttcggctttggaagggatggattgaa
tctcgattgagacagctgactctaaagattgagcgggacactaaagggatgctgcaatgc
catcctaacccatgtgaatatgcagatccttcaatacagtgtgctcactgtgccttctac
atgggcttatcaaggaaagagggaatgaaaatacgtggtcaaaaatttgatatccgtgga
acagtagacgagtttatgcatgaaattggaatgtatacacagtggaaatccgggatggat
ctagctgtcactcatgtccgtaagaaggagatccccctttatgtatttgaacagggctgc
cagaaaactcgtccaccaacgccaatatgtgcagagcagcaagaccagtctgataaaaat
gactctgaagtttgcacaacgacagcatctctggtgggtcagctcaagcgaaagtatcat
tctgttggaggtgctgacgttgactcattcaaatctgttagaagggcttcagttagcccg
gcttgtgaggaagcatcaattcagttgcatgatgatgcaaattttggactgactaattgc
tccacttcaccacatggatctgaggggtccactgtatcaggcaacagctgtgcagcagtt
ggcactattggtttggttgatgaaactagctga

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