Entry |
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Symbol |
Os02g0227400
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Name |
(RAP-DB) Poly(A) polymerase, RNA-binding region domain containing protein.
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KO |
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Organism |
dosa Oryza sativa japonica (Japanese rice) (RAPDB)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dosa00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Os02t0227400-01 (Os02g0227400)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dosa03019]
Os02t0227400-01 (Os02g0227400)
Enzymes [BR:dosa01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Os02t0227400-01 (Os02g0227400)
Messenger RNA biogenesis [BR:dosa03019]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
Os02t0227400-01 (Os02g0227400)
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SSDB |
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Motif |
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Other DBs |
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Position |
chr02:join(7145012..7145152,7145270..7145347,7145821..7145928,7147070..7147132,7147213..7147374,7147801..7147914,7147993..7148055,7148168..7148500,7148579..7148743,7148892..7149497)
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AA seq |
610 aa
MAGSFVAVRGKPRSSPKRSGGGGGADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEE
SAKREEVLREIDQIVKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDAL
CIGPSYVKREEEFFVMLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLP
VIPPDFDISQGSVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGV
YSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNL
GFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNK
ASWSSLFEPFQFFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQC
HPNPCEYADPSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMD
LAVTHVRKKEIPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYH
SVGGADVDSFKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSEGSTVSGNSCAAV
GTIGLVDETS |
NT seq |
1833 nt +upstreamnt +downstreamnt
atggcgggatctttcgtcgcggtcagggggaagcctcggtcgtccccgaagcggagcggc
ggcggcggcggcgcggatccgcccttgtctctggccatgccgaccgtcgccgatctccac
aagacggctgagttggagaagttcttggttgaagccggcctttatgaaggggaggaggag
tccgcgaaacgggaggaggttcttcgggagattgatcagatagtcaaggaatgggtgaag
aaggtcactattcagaaaggatatagtgagcaaatggttaaagaggcaaatgcagtcctt
ttcacttttggatcttacagactgggggttcatgggcctggagcagacattgatgcacta
tgtattggaccctcatatgtgaaacgagaggaggaattttttgtcatgctatatggcgca
ttatcagaaatggaagaagtgactgaactgcaacctgtacctgatgctcatgtaccagtt
atgaaattcaagtttcgtgggctaccaattgaccttctctatgccagtgtatctcttcca
gtaataccaccagattttgacatctctcaaggatctgtactttgtgatgttgatgaagca
actgttcgaagtctcaatgggtgcagggtggcagaccagattcttcgacttgttccaaat
gcggagatcttccggaaaacactcagatgtttgaagtactgggcacagagaagaggagtt
tattctaatgttactggtttgctggggggtgtcagctgggccctattggttgctcgtgtc
tgccaactttatcccaatgctgtgccaagtatgctggtttcaagattcttcagagttttc
acccagtggcagtggccaaatcctgtgatgctttgtgccattgagaacgatgataacctt
ggctttgctgtgtgggatccacgtaagaatcctcgtgatagatcacatgttatgcctatc
atcacgccagcatatccatgcatgaactctagttacaatgtttcaactagcacattgagg
gttattatggagcaatttcagtttggtaataagatttgtcaggaaattgagcttaacaag
gctagctggagttctttgtttgagcctttccaatttttcgaggcatatacaagatatcta
gtggttgacattgttgcagatgatgatgatgatcttcggctttggaagggatggattgaa
tctcgattgagacagctgactctaaagattgagcgggacactaaagggatgctgcaatgc
catcctaacccatgtgaatatgcagatccttcaatacagtgtgctcactgtgccttctac
atgggcttatcaaggaaagagggaatgaaaatacgtggtcaaaaatttgatatccgtgga
acagtagacgagtttatgcatgaaattggaatgtatacacagtggaaatccgggatggat
ctagctgtcactcatgtccgtaagaaggagatccccctttatgtatttgaacagggctgc
cagaaaactcgtccaccaacgccaatatgtgcagagcagcaagaccagtctgataaaaat
gactctgaagtttgcacaacgacagcatctctggtgggtcagctcaagcgaaagtatcat
tctgttggaggtgctgacgttgactcattcaaatctgttagaagggcttcagttagcccg
gcttgtgaggaagcatcaattcagttgcatgatgatgcaaattttggactgactaattgc
tccacttcaccacatggatctgaggggtccactgtatcaggcaacagctgtgcagcagtt
ggcactattggtttggttgatgaaactagctga |