KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0482400-01
Entry
Os02t0482400-01   CDS       T02163                                 
Symbol
Os02g0482400
Name
(RAP-DB) Similar to Ornithine decarboxylase (EC 4.1.1.17) (ODC).
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00330  Arginine and proline metabolism
dosa00480  Glutathione metabolism
dosa01100  Metabolic pathways
dosa01110  Biosynthesis of secondary metabolites
dosa04148  Efferocytosis
Module
dosa_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    Os02t0482400-01 (Os02g0482400)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    Os02t0482400-01 (Os02g0482400)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    Os02t0482400-01 (Os02g0482400)
Enzymes [BR:dosa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     Os02t0482400-01 (Os02g0482400)
SSDB
Motif
Pfam: Orn_Arg_deC_N
Other DBs
RAP-DB: Os02t0482400-01
Position
chr02:complement(16639823..16641196)
AA seq 457 aa
MAAAEGYQMEAAVLAAPVVKDREVLRLRRDAAGRRDVTGLVRTIVAAAPPPDSTTRTAAA
GAFNVIDLGEVARLFAAWWRGLRGVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA
VLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA
PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVSFHVGSAVSRVGIYAAAIE
AARVRRRRRARHAAHARARHRRGIQGRRRRRRIHVPGGKRRDQRGPREALRWRRHAQRRR
GDSRAGALLRRDGVRARRPHLREAHARRGARVLDRRRHVRHPVLRALRELRAAPGAGDRH
RRRRRRAGGDHGRRDDDHVDEHVDEDAPVDGVRPHAGLVRRGGEGLSAAGAVHRGLAGVR
RRRRVHHRVQLRLQRVLHVQHEDLPRLLLLDHWESAT
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggcagcagcagaaggatatcagatggaggccgccgtgctcgcggcgcccgtggtgaag
gaccgggaggtgctccgcctccggcgagacgcggccggccgtcgagacgttaccggactc
gtgcggaccatcgtcgccgcggcaccgccgcccgacagtacgacccgcaccgcggcggcg
ggcgcgttcaacgtgatcgacctcggcgaggtggcgcggctgttcgcggcgtggtggcgc
gggctccgcggcgtgcgtccctactacgccgtcaagtgcaaccccaacccggcgctgctc
ggcgcgctcgcggggctcggcgccggcttcgactgcgccagccgcgccgagatggaggcc
gtgctggcgctcggcgtcgcggccgaccgcgtcgtctacgcgaacccgtgcaagctggag
ccccacctggagtacgcggccggcgtcggcgtcgacctcaccaccttcgactccgaggag
gaggtcggcaagatcaagcgctgccacccggggtgccggctgctgctacggatcaaggcc
cccgacggcgacgatggcggcggcgccatgctaaacttgggaaccaagtacggcgcgcac
cgggacgaggtggtgccgctcctcgccgccgcgcggcgagccgggatggccgtcgtcggc
gtctcgttccacgtcgggagcgccgtgtcccgcgtcggcatctacgccgccgccatcgag
gcggcccgcgttcgacgccgccgccgcgctcggcatgccgcgcatgcacgtgctagacat
cggcgggggattcaaggccggcggcggcggcggcgaatccacgttccaggaggcaagcgc
cgtgatcagcgcggccctcgcgaggcacttcggtggcgacgacatgcccagcggcgtcga
ggtgatagccgagccggggcgctacttcgccgagacggcgttcgcgctcgccgcccgcat
cttcgggaagcgcacgcgcggcgaggtgcgcgagtactggatcgacgacggcatgttcgg
caccctgtgctgcgtgcacttcgagaactacgtgccgcgcccggcgccggtgaccgccac
cgccgacgacggcgacgagcaggcggcgaccatgggcggcgagatgatgatcacgtcgac
gaacacgtcgacgaagacgcacccgtcgacggtgttcggccccacgctggactcgttcga
cgaggtggtgaggggttatcagctgccggagctgtgcaccggggactggctggtgttcga
cgacgtcggcgcgtacaccaccgtgtgcagctcagacttcaacgggttctccacgtccaa
catgaagacctacctcgcctactcctgctagatcactgggaaagtgccacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system