KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0617500-01
Entry
Os02t0617500-01   CDS       T02163                                 
Symbol
Os02g0617500, ROCK-N-ROLLERS, RCK, RICE_MEIOTIC_CROSSOVER_1, RMC1
Name
(RAP-DB) DEAD-like helicase, N-terminal domain containing protein.
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os02t0617500-01 (Os02g0617500)
Enzymes [BR:dosa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Os02t0617500-01 (Os02g0617500)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    Os02t0617500-01 (Os02g0617500)
SSDB
Motif
Pfam: DEAD Sec63 Helicase_C ResIII AAA_22 T2SSE Helicase_C_2
Other DBs
RAP-DB: Os02t0617500-01
Position
chr02:join(24518702..24518790,24519036..24519219,24519332..24519493,24519595..24519832,24519941..24519977,24520046..24520092,24520406..24520443,24520625..24520646,24520735..24520947,24521069..24521225,24521309..24521360,24522215..24522286,24522395..24522444,24522551..24522666,24522749..24522814,24522886..24522969,24524025..24524150,24524229..24524346)
AA seq 623 aa
MAAMGHLGDPYALRSVADLPPPFRSVFGFRYFNSLQSECFPACFLSDVNMVISAPTGSGK
TVLFELCILRLLSRFLSSEWRFNLIKGTLKTIYIAPMKALVQEKLRDWNMKLGSLGISCL
EMTGDNEFYNTKSIHDADLILTTPEKFDSVSRHGIRDGGLGFFSDIALVLIDEVHLLNDP
RGAALEAIVSRIKMLSRLGTMKIAPLANVRFIAVSATIPNIEDIAEWLAVPSEGIKRFGE
EMRPVKLTTKVFGYAPARNDFLFERRLQSFIFDILMQHSRGKSALVFCSTRKGAQEAAQC
LSQTASSLGYSNPFMKSMQQYEHLKEAALTCSDKQLQACLVHGVGYHNGGLCLKDRSVVE
GLFLKGDIQILCTTNTLAHGINLPAHTVVIKSTQFFNKEKGLYVEYERSMVLQMCGRAGR
PPFDDTGTIIIMTRRETVHLYENLLNGCEMVESQLLPCAVEHLNAEIVQLTVSDITLAIE
WLKCSYLYIRIKKNPQHYGIKKEIPRELLEKQMKDICVEKIHELGEYGLIWTDEDGFLLK
PLEPGRLMTKFYLKFDTMKLIVKASACCTLEDLLHIICHSAEITWIQLRRNEKKLLNEIN
ADKEGRLWFHVVGANGKRKKRIQ
NT seq 1871 nt   +upstreamnt  +downstreamnt
atggcggcgatgggacatctcggcgacccgtacgcgctgcgctccgtcgcggaccttccc
ccgccattccgctccgttttcgggttcaggtatttcaattcgttgcagagcgagtgcttc
cctgcatgcttcctctcggatgtaaacatggttatctctgcgcctactgggagtggcaaa
accgtgctgttcgagctctgcattctaaggcttctctcaaggttcctctcatcagagtgg
aggtttaatttgatcaaaggaaccctgaaaacaatctatattgctccaatgaaggcgttg
gtgcaggagaagttgcgtgactggaacatgaagctgggctcgttggggatcagttgcttg
gagatgactggtgacaatgaattctataacaccaaatccatacatgatgctgacttaatt
ctcacaactcctgagaagtttgattctgtgagtcgtcatggaataagagatggtggactg
ggtttcttcagtgacattgctctggtccttattgatgaagttcatctcctcaacgatcct
cgtggagctgccctagaagcaattgtcagtagaataaaaatgctttctcgacttggcaca
atgaagattgctcctttggcaaatgttcgattcatagcagtttctgccactatccctaat
attgaggatatagcggagtggcttgcagtaccgtctgaaggaataaaaagatttggagaa
gagatgaggccagtgaagttgacaaccaaggtttttggttatgctccagcaagaaatgac
ttcctgtttgagaggagactccaaagtttcattttcgatatactgatgcaacattcaaga
ggaaagtctgcacttgttttctgttctactagaaaaggcgcacaagaagcagcacagtgc
ctttcacaaactgcgagttctctaggctattcaaatccatttatgaaatcgatgcagcag
tatgaacatctaaaggaggctgcactaacctgtagcgacaagcagttgcaggcttgtctc
gtacatggagttggttatcacaacggtggtctttgcctaaaggataggagtgtcgttgag
ggacttttcctgaagggtgatattcaaattctttgcacgacgaatactttggcacatggg
atcaacttacctgctcacacagtggtgataaagtcaacacaatttttcaacaaagagaag
ggtctgtatgtagaatatgagagatccatggttcttcagatgtgtggaagggctgggcgt
ccaccatttgatgatactggaacaattataatcatgacaagaagagagacagtgcatcta
tatgagaaccttctaaatggatgtgagatggtggagtctcagttacttccatgtgcggtt
gagcatctaaatgcagagattgttcagctgacggtgtctgatataactttggctattgag
tggctcaagtgctcgtatttgtacatcaggataaagaagaatcctcagcattacggaatt
aagaaagaaattccacgtgaacttcttgaaaagcaaatgaaagatatatgtgttgagaag
atccatgagctgggggagtatggtctaatttggacagatgaagatggtttccttctaaaa
ccattagaacctgggaggctgatgacaaaattctatctgaaatttgatactatgaagctt
attgtcaaagcttctgcctgttgcactttggaagatctgttgcatatcatctgccactct
gcagagattacttggatccaactacgacgaaatgagaagaagctccttaatgagataaat
gctgacaaagagggaaggctttggttccatgttgttggtgcaaatgggaaaaggaagaag
cgtattcaaac

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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