KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0105600-01
Entry
Os03t0105600-01   CDS       T02163                                 
Symbol
Os03g0105600, TUB2, BETA-TUBULIN_2
Name
(RAP-DB) Tubulin beta-1 chain (Beta-1 tubulin).
  KO
K07375  tubulin beta
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04145  Phagosome
dosa04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    Os03t0105600-01 (Os03g0105600)
  09142 Cell motility
   04814 Motor proteins
    Os03t0105600-01 (Os03g0105600)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os03t0105600-01 (Os03g0105600)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dosa04812]
    Os03t0105600-01 (Os03g0105600)
   04147 Exosome [BR:dosa04147]
    Os03t0105600-01 (Os03g0105600)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     Os03t0105600-01 (Os03g0105600)
Cytoskeleton proteins [BR:dosa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    Os03t0105600-01 (Os03g0105600)
Exosome [BR:dosa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Os03t0105600-01 (Os03g0105600)
  Exosomal proteins of colorectal cancer cells
   Os03t0105600-01 (Os03g0105600)
  Exosomal proteins of bladder cancer cells
   Os03t0105600-01 (Os03g0105600)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Misat_Tub_SegII Tubulin_2
Other DBs
RAP-DB: Os03t0105600-01
Oryzabase: 2957
Position
chr03:join(340087..340480,340557..341506)
AA seq 447 aa
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADDEGEYEDEEEEADLQD
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagggagatcctccacatccagggtgggcaatgcgggaaccagatcggcgccaagttc
tgggaggtggtgtgcgcggagcacgggatcgacgccaccgggcgctacgacggcgactcc
gacctgcagctggagcgcgtcaacgtgtactacaatgaggcctcctgcgggcgcttcgtc
ccgcgcgccgtgctcatggacctggagccgggcaccatggactccgtccgctccggcccc
tacggccacatcttccgcccggacaacttcgtcttcggccagtccggcgccggcaacaac
tgggccaagggacactacaccgagggcgccgagctcatcgacgccgtcctcgacgtcgta
cgaaaggaggccgagaactgcgactgcctccaagggttccaggtttgccactcgcttggc
ggcggcacggggtccggcatgggcacgctcctcatctccaagatccgggaggagtacccc
gaccggatgatgctcaccttctccgtcttcccctcgcccaaggtctccgacaccgtggtg
gagccctacaacgccaccctctccgtccaccagctcgtcgagaacgccgacgagtgcatg
gtgctcgacaacgaggccctctacgacatctgcttccgcaccctcaagctcaccacccca
agcttcggcgacctcaaccacctcatctccgccaccatgagcggcgtcacctgctgcctc
cgcttccccggccagctcaactccgacctccgcaagctcgccgtcaacctcatccccttc
cctcgcctccacttcttcatggtcggcttcgccccgctcacctcccgcggctcgcagcag
taccgcgccctcaccgtcccggagctcacccagcagatgtgggacgccaagaacatgatg
tgcgccgccgacccccgccacggccgctacctcaccgcctccgccatgttccgcggcaag
atgtccaccaaggaggtggacgagcagatgctcaacgtccagaacaagaactcctcctac
ttcgtcgagtggatccccaacaatgtcaagtccaccgtctgcgacatcccccccaccggc
ctcaagatggcctccaccttcatcggcaactccacctccatccaggagatgttccgccgc
gtcagcgagcagttcaccgccatgttccgcaggaaggccttcttgcactggtacacgggc
gagggcatggacgagatggagttcaccgaggctgagagcaacatgaacgacctcgtctcc
gagtaccagcagtaccaggacgccaccgccgacgacgagggtgaatacgaggatgaggaa
gaagaggctgatctccaggactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   ORYZABASE (1)   
   RAP-DB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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