KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0694900-01
Entry
Os03t0694900-01   CDS       T02163                                 
Symbol
Os03g0694900
Name
(RAP-DB) Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS).
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Os03t0694900-01 (Os03g0694900)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dosa01007]
    Os03t0694900-01 (Os03g0694900)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dosa03016]
    Os03t0694900-01 (Os03g0694900)
Enzymes [BR:dosa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     Os03t0694900-01 (Os03g0694900)
Amino acid related enzymes [BR:dosa01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   Os03t0694900-01 (Os03g0694900)
Transfer RNA biogenesis [BR:dosa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Os03t0694900-01 (Os03g0694900)
 Prokaryotic type
    Os03t0694900-01 (Os03g0694900)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 tRNA-synt_1g tRNA-synt_1_2 tRNA-synt_1e Val_tRNA-synt_C E2F_CC-MB
Other DBs
RAP-DB: Os03t0694900-01
Position
chr03:join(27827229..27827309,27827491..27827550,27827669..27827838,27827937..27828009,27828132..27828197,27828298..27828381,27828717..27828794,27829045..27829128,27829480..27829559,27829722..27829779,27829871..27830173,27830263..27830433,27831007..27831197,27831320..27831722,27832282..27832533,27832613..27833113,27833217..27833314,27833436..27833535,27833758..27833903,27834009..27834174)
AA seq 1054 aa
MSSVTPAADAQPLDEKELERKLKKDQKAKEKEEKRLKAKAKEAARLQAQAASDGPKKSEK
KQRKKAVEDENPEDFIDPDTPHGQKKFLASQMAKQYSPTAVEKSWYSWWESSGYFGADAA
SSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRWRRMSGYNTLWVPGVDHAGIATQVV
VEKKLMRERNLTRHDIGREEFVSEVLKWKDEYGGTILNQLRRLGASLDWSRECFTMDKPR
SKAVTEAFVRLYKQGLIYRDYRLVNWDCTLRTAISDVEVDYLEIKEETMLKVPGYNTTVQ
FGVLISFAYPLEEGLGEIIVATTRIETMLGDTAIAVHPEDGRYKHLHGRYAIHPFNGRKL
KIICDAELVDPTFGTGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGKINNNGGAQFVGI
PRFTARVAVIEALKAKGLYKETKKNEMSLGVCSRTNDVVEPMIKPQWFVNCNTMAQAGID
AVRSKRIEIIPQQYEQDWYRWLANIRDWCISRQLWWGHRVPAWYVILEDDQEKILGSANG
RWIVARNESEANLEAQQKYPGKKFELHQDPDVLDTWFSSGLFPLTVLGWPDDTADLKAFY
PGSVLETGHDIIFFWVARMVMMGMQLGGDVPFEKVYLHPMIRDAHGRKMSKSLGNVIDPV
DVINGISLDGLLKRLKEGNLDPNELNIATEGKKKDFPDGIAECGTDALRFALVSYTSQSD
KINLDIKRVVGYRQWCNKLWNAIRFAMGKLGNHYTPPATISVTTMPPICKWILSVLNKAI
GKTVTSLEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNDSQEFESARAASRDALWVC
LDTGLRLLHPFMPYVTEELWQRLPQPKDSCRKDSIMVSEYPSVVKEWTDDKLENEIDIAL
DTINKLRSLKPPSDTNERRPAFALCRGQEITATIQCYQSLVVSLSSTSSLKILTENDETP
PDCATAVVNKDLSVYLQLQGALNAEVELEKLRKKREEIQKLQHALSQKMEASGYKEKAPQ
NVQEEDMRKLTSFFEQLEIISEAEKKLDAKTGNN
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgtccagcgttacccctgctgccgacgcgcagccactcgatgagaaagagctggagcgg
aagctgaagaaagatcagaaggcaaaagagaaagaggaaaaaaggcttaaggcgaaggca
aaggaggcggctaggctccaggcacaagcagcttcagatggacctaagaaaagcgagaag
aagcaaaggaagaaagctgtggaggatgagaatcctgaggatttcattgatccagacact
cctcatgggcagaagaaatttcttgcatctcaaatggccaagcagtatagcccaactgct
gttgagaaatcatggtattcctggtgggaatcatcaggatattttggggcagatgctgca
agctcaaagccaccatttgttatagttttgccacctccaaatgtcactggagcgcttcat
ataggccatgcacttacggtggctatagaggattccatgatacgctggcggaggatgtca
ggttataacactctgtgggttccaggagttgaccatgcaggaatcgctactcaggttgta
gtggagaagaagcttatgcgtgaaaggaatttgacaaggcatgacatagggcgtgaagaa
tttgtatctgaagttctcaaatggaaagatgaatacgggggtaccatattgaatcaattg
cgtaggcttggggcctcacttgattggtcccgcgagtgttttacaatggataaaccaaga
tcaaaggctgtaactgaagcttttgtcaggttgtacaaacaaggcctgatatatagggat
tatcgcctcgtgaattgggattgcacccttcgaacagcaatttctgacgtagaggttgat
tatctagagattaaagaggaaactatgttaaaggttcctggttataatacaactgtacaa
ttcggtgtgttgatctcttttgcatatccacttgaggaaggattgggtgagattattgtc
gcaacaacaagaatcgaaacaatgcttggggatacagccattgctgttcaccctgaggat
ggcagatacaagcatctgcatggtaggtatgcaatccatcccttcaatggccgaaagctc
aaaataatctgtgatgctgagttagtggatcccactttcggtactggggctgtcaagatt
acacctgcccatgatccaaatgattttgaggttggaaagcgacacaaccttgagttcatc
aatatcttcacagatgatggaaaaataaacaacaatggaggtgcacaatttgtaggaatt
ccaagatttactgctcgagttgctgttattgaggcactgaaggcaaagggcttgtacaag
gagacaaagaagaacgaaatgagtttgggtgtttgttcaagaactaatgatgtggtggag
cctatgataaaaccccaatggtttgttaattgcaataccatggcacaagcaggtattgat
gctgtaaggtccaaaagaattgagattattccacaacagtatgagcaagactggtataga
tggcttgcaaatatacgtgattggtgtatttcgaggcagctttggtggggacatcgcgtt
cctgcttggtatgttatactagaagatgatcaagagaaaattctgggttctgctaatggc
cgttggattgttgctagaaacgaaagtgaagcaaacctggaggcacagcaaaagtatcct
gggaagaaattcgagttacatcaagatcctgatgtgttggatacatggttttcatctggt
ctcttcccattaaccgtacttggttggccagatgatacagctgaccttaaagctttctac
cctggttcggtgctagaaactggacatgacattatcttcttttgggtagcacggatggtg
atgatggggatgcaacttggtggcgatgtgccatttgagaaggtttatttgcaccctatg
atacgtgatgctcatggacgcaaaatgtccaagtcgcttggtaatgtcattgatcccgtt
gatgtgataaatggcatttcactggatggtctcctcaaacgtttgaaagaaggcaatcta
gatccaaatgaattgaacattgcaacagaagggaagaagaaggattttcctgatggcatt
gctgaatgtggtaccgatgctctccgttttgcactggtttcttacacttcgcagtctgac
aagataaacctggatatcaaacgagttgttggatatcgacagtggtgcaataaattatgg
aatgccattcgttttgcaatgggcaagcttggcaatcattacactccccctgcaactatt
tctgtaactacaatgccacccatatgcaaatggatattgtcagtacttaataaagctatt
ggcaaaactgtcacctcgttagaagcatacaaattttctgatgctacatctgctatatac
tcgtggtggcagtaccaactatgtgatgtgttcatagaagctataaagccttacttcttc
aatgactctcaagagtttgaatcagcaagagctgcctctagagatgccttatgggtttgc
ttagacactggtttgcgcttgctccacccattcatgccttatgttacagaagagctctgg
cagcgtcttcctcagcctaaagattcttgtcggaaagattccattatggtatcagagtac
ccatctgttgttaaggaatggacggatgataaacttgaaaatgagatagatattgcctta
gatactatcaacaaactaagatctctgaagccaccatctgatacaaatgagagacgacct
gcttttgcactttgccgaggccaagagattactgccaccattcagtgttatcagtctcta
gttgtgtctctttcttccacatcatctctaaagatcctgacagagaatgatgaaacgcca
cctgactgtgcaacagctgttgtaaacaaagatttgtctgtataccttcaactccaagga
gctctcaatgcagaagttgagcttgaaaagctgaggaaaaagagagaagaaattcaaaag
ctccaacacgcactgtcacagaaaatggaagcttctggttacaaagagaaggctccacag
aatgtccaggaggaggacatgagaaaactcactagtttttttgaacagctagagattatc
agtgaagctgaaaagaagctagatgcaaaaactggcaataattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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