KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0275100-00
Entry
Os05t0275100-00   CDS       T02163                                 
Symbol
Os05g0275100
Name
(RAP-DB) Pentatricopeptide repeat domain containing protein.
  KO
K17964  leucine-rich PPR motif-containing protein, mitochondrial
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:dosa03029]
    Os05t0275100-00 (Os05g0275100)
Mitochondrial biogenesis [BR:dosa03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    Os05t0275100-00 (Os05g0275100)
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27 E_motif
Other DBs
RAP-DB: Os05t0275100-00
Position
chr05:complement(11261810..11264629)
AA seq 939 aa
MPHGCHFLRPLSFTCRRRRLHSSLPRADGDGTEAGAATDTTLLGRFTRLLLLHRFPAAER
LLASSSPLTPALLQAALRRVRLDPDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDAR
ALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCR
PSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEF
VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK
DGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLF
VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM
VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT
EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL
FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL
SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL
VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK
SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL
CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTV
ITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDE
MHIRGLLPTNWIGNWKRSDPVVVNNWNRKDGHMKTYSQC
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgcctcatggctgccacttcctccggcccctctccttcacctgccgccgtcgccgcctc
cactcctccctgccacgcgccgatggcgacggcaccgaggcgggcgctgccaccgacacc
accctcctcggccgcttcacccggctcctcctcctccaccgcttccccgccgccgagcgc
ctcctcgcgtcgtcctcgcccctcacccccgccctcctccaagccgccctccgccgcgtc
cgcctcgaccccgacgccgccctccatctcttccgcctcgcgccgtcccgcccctccctc
gtctcccacgcccagctgctccacatcctggcccgcgcccgccgcttccacgacgcccgc
gccctcctctcctccctccctccccacgccgagcctctctttccccacctcgccgaggtc
tacagggacttcaccttctccgctgtctccttcgacttgctcctccgcgcccatgccgac
gcaggccagctttccagcgccctcaacgtgttcgacggaatgggaaaggtcggttgccgc
ccctccctgcggtcctgcaatcgcttgctcaataagctagtgcagtctggggatccaggc
atggcggccatggtgtatggacagatgcggattgctggagtattgcccgatgaattcaca
gtggctatcatggcaaaggcatactgcagggatgggagggtggcacaggcagtggagttt
gtggaggagatggaagggatgggtttagaagtgaatctggtggcatatcatgcggtgatg
gattgttattgtgggatgggatggaccgaagatgcgagaaggatattggagtcgttgcag
cgaaagggcttgtcaccgaatgtggtgacatataccctccttgtgaagggatactgtaag
gatgggaggatggaggaagctgagagggtggtgaaggagatgaaggaaaccggggatatt
gtagttgatgaggtggcttatggtatgatgatcaatggctattgccaaagggggagaatg
gatgatgcaactagggtaagaaatgagatgagggatgcagggatacatgtgaacttattt
gtctataacacaatgatcaatggattgtgcaagttggggagaatggaggaagtacaaaaa
gttctacaggaaatggaggacgtagggatgaggccggacaaatacagttacaatactcta
atagatgggtattgcagagagggttccatgcgcaaagcatttgaaatgtgtcgcatgatg
gtaaggaatggtcttgcagcaactacattgacatataacacactcctgaaaggtttttgc
tctctccatgctattgatgatgcacttagattatggtttttgatgctgaagaggggtgtg
gcacctaatgaaattagctgtagcactttgttggatggtttgttcaaggcaggtaaaact
gagcaggccttgaacctttggaaagaaaccttagcaaggggtttagcaaaaaacgtaatc
acatttaatactgttattaatgggttatgcaagattgggaggatggccgaagcagaagag
cttcttgacaggatgaaggaattgagatgccctccggatagcctaacttacagaacatta
tttgatggttactgtaaactaggtcaactaggtacagctactcaccttatgaataagatg
gagcatttaggttttgctccttcagttgaaatgttcaattctttcattactggacatttt
atagctaagcaatggcacaaggtgaatgatatccatagtgaaatgagtgcaaggggactt
tctcctaatttagtcacttatggagctctgatagctggatggtgcaaagaaggaaatttg
catgaggcctgtaacttgtattttgagatggttaacaatggtatgaacccaaatgtgttc
atatgcagtgcgttaatgagctgtttctataaggaggggaaggttgatgaggcaaatttg
gtgctgcaaaaactcgtaaatattgacatgattccaggttgcagtataagcacgattgag
attgataaaatatcacatgtcgttgatactattgctgatgggaaccctcattctgcaaat
gtgatgtggaatgttattatatttgggctatgcaaatcaggaaggattgcagatgctaaa
agtttgtttgagagtctacggaacaagagatttctcccagataatttcacttattctagc
ctcattcatggttgtgctgcttctgggtctattgatgaagcttttagtctgagggatgtg
atgttgagcgctggtctcactccaaatattataacgtacaattctcttatctatggcctc
tgcaagtctgggaagctatcaagggcagttaaccttttcaataagttgcagtcgaagggt
atatcgccgaatggtatcacatataatacacttatagatgaatactgcaaggaaggaaaa
acaacagaagcttttaaattaaaacaaaagatggtagaggaaggtattcagcctaccgta
ataacctattctatactgatctatggtttgtgtactcaagggtatatggaagaagcaatc
aagttactggaccaaatgattgagaacaatgtagatccgaattatattacatactgtaca
ctgattcatggttacattaaatctggtaatatggaagagatttcaaagctttatgatgag
atgcatatccgtggacttctcccaaccaattggattggaaattggaaacgatcagatcct
gttgttgtaaacaactggaacagaaaagatggtcatatgaagacgtacagtcagtgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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