KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0558900-01
Entry
Os05t0558900-01   CDS       T02163                                 
Symbol
Os05g0558900
Name
(RAP-DB) Similar to Frsb-prov protein.
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Os05t0558900-01 (Os05g0558900)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dosa01007]
    Os05t0558900-01 (Os05g0558900)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dosa03016]
    Os05t0558900-01 (Os05g0558900)
Enzymes [BR:dosa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     Os05t0558900-01 (Os05g0558900)
Amino acid related enzymes [BR:dosa01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   Os05t0558900-01 (Os05g0558900)
Transfer RNA biogenesis [BR:dosa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Os05t0558900-01 (Os05g0558900)
 Prokaryotic type
    Os05t0558900-01 (Os05g0558900)
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 tRNA-synt_2d EAD7 DUF2740
Other DBs
RAP-DB: Os05t0558900-01
Position
chr05:join(27801034..27801091,27801193..27801248,27801348..27801457,27802473..27802602,27802785..27802900,27802995..27803061,27803293..27803334,27803477..27803518,27803680..27803756,27804054..27804180,27804277..27804444,27804683..27804808,27804899..27805009,27805100..27805234,27805864..27805938,27806151..27806258,27806339..27806425,27806511..27806597,27807086..27807154)
AA seq 596 aa
MPTVSVGRDRFFVALGRTYTQEEFEVLCFEFGIELDDVTTEKAIIRKEKHLEDDDGEVDG
DDDEVIYKIEVAANRYDLLCLEGLARALRIFTGTEATPMYKISCIPRDSMLLMHVKPQTS
QIRPYVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLKGPFSYEA
LPPQEINFVPLKQEESFRADKLMEFYKSDMKLKKFLHIIENSPVYPVIYDSNRTVLSLPP
IINGAHSAITLKTRNVFIECTATDLTKAKIVLNTMVTMFSEYCENKFEVEPVEVVSHDGS
KTIYPDLSCYKMEVSLSEVVGPIGISLDETKVISLLNKMQLQAESCPSKGEPRISVSVPP
TRSDILHARDLVEDVAIAYGYNNVPKSKPKCMTIGGRQPLNRFSDKLRAEVARAGYMEVL
TFTLCSREENFDMLNRTQDVNKAVIIANPRTSEFEVVRTSLMSCLLKTLKHNIDHPRPIK
IFEVGDVVTLDGSRDVGASNNRRLAALYCNKQSGFEEIMGLVDRIVNVVRAPHIKFGQNY
YVPTNEPEFFPKRQCKIVMSDGKQIGYLGIVHAEVLRKFGIPDPCTFVEIDVEALL
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgccgacggtgagcgtcggccgggaccgcttcttcgtcgccctcggaaggacatacacg
caggaggagttcgaggtgctctgcttcgagttcggcatcgagctcgatgacgtgaccacg
gagaaggccatcatccggaaggagaagcacctggaggatgatgacggcgaggtggatggt
gatgacgacgaggtcatctacaagatcgaggtcgccgccaataggtatgatttgttatgt
cttgaaggattggcaagggccctccgcattttcactgggactgaagcgacccctatgtac
aaaatttcttgcatccctcgcgattcaatgcttctgatgcatgttaaacctcagacttca
caaataaggccctatgtggtctgtgctgtccttagaggggtaactttcgatgaagcaaga
tataacagcttcatcgatcttcaagacaaactccatcaaaatatttgcaggaagagaact
ctggtggccataggtacccacgatcttgacactctgaaaggacccttttcatatgaggct
ctaccaccacaagagatcaactttgtcccattaaagcaggaggaaagcttcagggctgat
aaactgatggaattctataaatcagacatgaagttgaagaagttcctgcatataattgag
aattcgccagtatacccagttatttatgatagcaacaggaccgtattgtctttaccacca
atcatcaatggtgcacattctgctatcactctgaagacaaggaatgtgtttattgagtgt
accgctactgaccttacaaaagcaaagattgttctcaatacaatggtcacaatgttctct
gagtactgcgaaaacaagtttgaagtggaaccagttgaagttgtgtcacatgatggaagc
aaaaccatttaccctgacctttcatgctataaaatggaggtctcactatctgaggttgtt
ggacccattggcatctccctagatgagacaaaggttatttcccttctgaacaaaatgcag
ttgcaagctgaaagttgtccatcaaaaggggaaccacgtatttcagtttctgtccctcca
acaagaagtgacattctgcatgctcgtgatttggtggaggatgttgctatagcttatggt
tacaacaatgtgccaaaatcaaagccaaagtgtatgacaataggaggaaggcaaccatta
aaccgtttctctgataaacttcgtgctgaggttgcaagagctggttatatggaggtgctc
acatttaccttgtgttcacgtgaagaaaactttgacatgttaaataggacacaggatgta
aataaagcagttattattgcgaatccacgcacttctgaatttgaggtggttcgaaccagt
ctgatgtcatgtttattgaaaactttgaagcataacatagaccatccaagacccataaag
atatttgaagttggtgatgtagtgacattggatgggtcacgtgatgttggtgcttctaat
aatcgtcgactcgcagctttgtactgtaataagcagtctgggtttgaggaaattatgggt
ttggtagatagaatcgtgaatgttgtgagagctccccacatcaaatttggccagaattac
tatgttcctacaaatgaacctgaattctttccgaaaagacaatgcaaaattgttatgagt
gatggaaagcagattggctacttaggaattgtgcatgccgaggtcctaaggaaattcggc
attccagacccctgcactttcgttgagattgacgttgaggctttgttatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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