KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0569800-01
Entry
Os05t0569800-01   CDS       T02163                                 
Symbol
Os05g0569800
Name
(RAP-DB) Tho complex subunit 7 domain containing protein.
  KO
K13176  THO complex subunit 7
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Os05t0569800-01 (Os05g0569800)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os05t0569800-01 (Os05g0569800)
   03041 Spliceosome [BR:dosa03041]
    Os05t0569800-01 (Os05g0569800)
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     Os05t0569800-01 (Os05g0569800)
Spliceosome [BR:dosa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Os05t0569800-01 (Os05g0569800)
SSDB
Motif
Pfam: THOC7 APG6_N ArsR GP24_25 DUF5082
Other DBs
RAP-DB: Os05t0569800-01
Position
chr05:complement(join(28357784..28358377,28357313..28357450))
AA seq 243 aa
MLAKGRKVAGRGGDMSAHYAFGLQEDDAIIKRRLLTRTTTTRGEPPLKKLQKKFMSFATE
VEKDADNISDCERLYKAFLQEINAFVLPLLKSKAVVDANLREKESFNELQDEIQRQILQA
QTDIEELKKKLEQSRIERLYKEECEAIRKMISLQPPRSETEKLIAGLEKEIANLEAENTA
CIRTLELRKKQLSLLLHVVEELQISIEDEQRSIADELRAGAEEQQNMSTDEGSGDASDAM
ALD
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcttgccaaagggaggaaagttgctggaaggggtggagacatgtctgcacactatgca
tttgggctgcaggaagatgatgcgatcattaaacgtaggcttctgaccaggacaacaact
accaggggtgaaccaccactaaagaagcttcagaagaagttcatgtcctttgccactgag
gttgagaaggatgctgacaacataagtgactgtgagaggttgtacaaggcctttttacag
gaaattaatgcttttgtgttgcctcttcttaagagcaaggccgtggttgatgcaaacctt
agggagaaggagagcttcaacgagctgcaagacgagattcagcgacaaatcttgcaagct
cagactgatattgaggaactcaaaaagaaactggaacagagcagaattgagaggctgtac
aaagaggagtgcgaagcgatcagaaaaatgatttctttgcagcctccacgatcggaaaca
gagaagctcatcgcgggtcttgagaaggagattgctaatttggaggccgagaatacagca
tgtataaggactctggaactaaggaagaagcagctttctcttcttcttcatgtggtcgag
gaattgcagatctcaatcgaagatgagcagaggagcatagcggatgagctgagagctggc
gctgaagagcagcagaacatgagcacagatgaaggtagcggcgatgcttcagatgccatg
gctttagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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