KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0592600-01
Entry
Os05t0592600-01   CDS       T02163                                 
Symbol
Os05g0592600
Name
(RAP-DB) Translation initiation factor 2 related domain containing protein.
  KO
K03243  translation initiation factor 5B
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:dosa03012]
    Os05t0592600-01 (Os05g0592600)
Translation factors [BR:dosa03012]
 Eukaryotic type
  Initiation factors
   eIF-5
    Os05t0592600-01 (Os05g0592600)
SSDB
Motif
Pfam: GTP_EFTU IF-2 GTP_EFTU_D4 GTP_EFTU_D2 MMR_HSR1 Roc ATP_bind_1
Other DBs
RAP-DB: Os05t0592600-01
Position
chr05:complement(join(29534483..29534530,29532062..29534236,29531859..29531966,29531674..29531774,29531492..29531582,29531318..29531428,29531164..29531229,29530524..29530583,29529891..29530448,29529570..29529689,29529365..29529484,29529192..29529257))
AA seq 1207 aa
MGRKKNVAIDDDEYSFDALAADEDQGEDDDEAPAPAPAPVEPDAAAKSDAEDDDLDFDFS
KAKKKKKKKDKGARPVPLEHDDLDLDKPAPPPPAAAADEADDDEAAAAAASKKPQKKKKK
KGGFTVDNEDIDKLLAEIDDTSPPTEEAEPVEEVPAPDADDALGKKSKKKKKKGGFTVDD
EDVDKILAEFEDQPPPVDDPEPEPEAVKDVGNVAASTSVDDAEGKKSKKKKKKSGRTAQE
EEDLDKLLAELGEGPTPAEKEKEVLPQAPPAAAMVKEDTETAEDGKAGEGEVESAAAKKK
KKKKEKEKEKKAAAKEADAKKEEEKAVEAPKGKVDMKKLPKHVREMQEALARRQEAEERK
KREEEERLRKEEEERLKKEEEERKAEEAKRRKKEREKEKLLKKKQEGKLLTGKQKEEAKR
LEAMRRQFLEQSELQVADGAVPETKKRPIYDSKKKKGQQKTLETAKVVEEQPQEVNETIN
DEEEYVLVDQESQLQVEESEKTEPDQDVEELKPEEEEDEDEWDAKSWDDIDVNLPKTSAF
EEEEANPVAKKVAEPVQKQENSKAQSTVATVKKVANSNKGETEDGESSSANARRNRGASK
KGPIKEDETKNGSDLRSPICCILGHVDTGKTKLLDCIRRTNVQEGEAGGITQQIGATYFP
TENIRERTKELKADATLKVPGLLVIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEPQ
TIESLNLLKSRDAVFIVALNKVDRLYGWKKCTNAPIGKALRQQNEDVKREFNMRLTDIVT
QFKMQGVNTALYYKNKEMEDTYNIVPTSAISGEGIPDLLLLLVQWAQKTMEERLTFVDEV
QCTVLEVKVVEGHGTTVDVVLVNGILHEGDQIVVCGMQGPIVTTVRALLTPHPMRELRVK
GTYQHHKKIRAAQGVKISAQGLEHAIAGTALYVLKPDDDLDRLKDAVMEEMTRVRNRIDK
SGEGVYVQASTLGSLEALTEFLKSPAVNIPFCDFSIGPVHKKDVMKASVMLERKKEYATI
LAFDVKVMPDARDLAEESGVRIFVADIIYHLFDQFTAYIKNLREEKKKESAEEAVFPCVL
KIMPNCVFNKKDPIVLGVDVLEGIAKVGTPLCIPTKEYIDIGKIASIEINHKQVDMATKG
QKVAIKIIGSNPDEQQKSFGRHFDMEDELVSRITRRSIDLLKENYRDDLSMDDWKLVVKL
KSILKIP
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgggtcgcaagaagaacgtcgccatcgatgacgatgagtactccttcgacgccctcgcg
gccgacgaggaccagggagaagacgacgacgaggcccccgcccctgcccccgcccccgtc
gagcccgatgccgccgccaaatcagacgccgaggacgacgacctcgatttcgacttcagc
aaagccaagaagaagaaaaagaagaaggacaagggagctcgcccagtccctctggaacac
gacgacctcgacctagataagcctgccccgccgcccccagccgccgctgctgatgaggca
gacgacgacgaggctgctgcagctgcagcttccaaaaagcctcagaagaagaagaaaaag
aagggcggctttactgtggacaatgaggacattgacaagctcctcgccgagatcgacgat
acttctcctcccaccgaagaggctgagccggtggaagaggtgcctgcccctgatgcagat
gatgccttaggaaagaaatcaaagaagaagaaaaagaagggaggctttaccgtcgatgat
gaggacgtagacaagatcctcgcagagtttgaggaccagccacctcctgtcgacgatcct
gagcctgagcctgaggcggtgaaagatgtgggtaatgtggccgcctcaaccagtgtggat
gatgcggaaggcaagaaatcgaagaagaaaaaaaagaagagtggaaggacagctcaggaa
gaggaggatttggataagcttctcgctgagcttggtgagggcccaacgccagcagaaaag
gagaaggaggttctgccccaggcgccacctgctgcggcaatggtgaaggaagatactgaa
accgcagaggatggtaaggctggggaaggagaggtggaatctgctgcagccaagaagaag
aagaagaagaaggaaaaggagaaggagaagaaggcagcagctaaggaggcagatgctaag
aaagaagaggaaaaggctgtagaagctcctaaagggaaggttgacatgaagaagctcccg
aagcacgtgcgggagatgcaggaggcacttgccaggaggcaggaagctgaggaacggaag
aagcgtgaggaggaagaacgattgaggaaagaggaggaggagcgattgaagaaagaggag
gaggagaggaaagctgaggaagcaaagaggaggaagaaggagagagaaaaggagaagttg
ctgaagaagaagcaggagggtaagctcttgactgggaagcagaaggaggaagcaaagagg
ttagaagcaatgaggagacaattccttgagcagagtgaacttcaagtagccgatggtgct
gtccctgagacaaagaagaggcctatatatgattccaagaagaaaaaaggtcaacagaag
actctggagactgcaaaggtagttgaagaacaaccacaagaagttaacgaaactatcaat
gacgaggaagaatatgtgttagtggatcaggaatctcagttgcaagtggaggaatctgag
aaaaccgaacctgatcaggatgtcgaagaattgaaaccagaagaggaggaagatgaagat
gaatgggatgcaaagagctgggatgatatagatgtcaatttgcctaagacaagtgccttt
gaggaggaagaggcaaaccctgtcgccaagaaggttgctgaacctgttcagaagcaggaa
aattctaaagcacaatctacagtggctactgtaaaaaaggttgcaaactccaataaaggt
gaaacggaagatggcgaatccagtagtgcaaatgctaggaggaatagaggcgcttcaaag
aaaggacctattaaagaggatgagactaagaatggcagtgaccttcgttcaccaatttgt
tgcatccttggtcatgtcgatactggtaagacaaaactgctagactgtattagacggacc
aatgtacaagaaggagaagctggaggtattacccaacagattggggctacgtacttccca
actgaaaatattagagagagaacaaaagagcttaaagctgatgccacacttaaggttcca
ggattgcttgttattgacactcctggtcacgagtcgttcagtaatctgcgttctagaggt
tcaagtttgtgtgacattgctattttggttgttgacattatgcacggtcttgaacctcaa
acaattgaatccctgaatctcttgaagagccgtgatgcagtttttatcgttgccttaaat
aaggttgatcgtctttatggctggaaaaagtgtacaaatgcccctattgggaaggctttg
aggcagcaaaatgaagatgttaagagggagttcaatatgaggcttactgatattgtgaca
caattcaagatgcaaggtgtgaatactgctttgtactacaagaacaaggagatggaagat
acatataacatagtgcctaccagtgcaataagtggtgaaggcattcctgatctgcttctt
ctgttggtgcaatgggcacaaaagacgatggaagaaagacttactttcgttgatgaagtc
cagtgtaccgtgctggaagtcaaggttgttgaaggtcatggtactacagttgatgttgtg
ttggtcaacggtatactccatgaaggagatcaaatagttgtgtgtgggatgcagggaccc
attgtgacaacagttagagctttgttgacaccacacccaatgagggagcttcgagttaag
ggcacataccaacatcataagaagattagagctgcacaaggagttaaaatatcagcacag
ggtcttgaacatgcaattgcagggactgctctttatgtgttaaagcctgatgatgatctg
gacagactaaaagatgctgtgatggaagagatgactagggttagaaatcggattgataag
agtggcgaaggtgtctatgtacaggcatctacccttgggtcattggaagctctcactgag
ttcttgaagagccctgctgtgaatattcccttctgtgatttcagtatagggccagtccac
aagaaagatgttatgaaggccagtgttatgcttgagaggaagaaagaatatgctactatc
ttggcgtttgatgtcaaagtgatgcctgatgcccgtgatcttgcagaagagtctggtgtg
aggatctttgtagcagatataatataccacctttttgatcaatttactgcatacattaag
aatctgagggaagaaaagaagaaagaaagcgctgaagaagctgttttcccctgtgttctc
aagattatgccaaattgtgtttttaacaagaaggatccaattgttttaggtgttgatgtc
cttgaaggaatagccaaggtgggcacacctctatgcatacccactaaagaatatattgat
attgggaagattgcatctattgaaattaatcataagcaagttgacatggccacaaaaggg
cagaaggtggctataaagattattgggagcaatcctgatgagcagcagaagagttttggt
aggcattttgacatggaagatgaacttgttagtcgcatcacaaggcgatctattgatctt
ctcaaagaaaactatagagacgatttgtcaatggatgactggaaacttgttgttaagttg
aagagcatcttgaagataccataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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