KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os06t0728000-01
Entry
Os06t0728000-01   CDS       T02163                                 
Symbol
Os06g0728000
Name
(RAP-DB) HMG1 protein (HMGB1).
  KO
K25507  high mobility group B protein, plant
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os06t0728000-01 (Os06g0728000)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    Os06t0728000-01 (Os06g0728000)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SLT Protamine_like PPP4R2 Thg1C DDHD YABBY
Other DBs
RAP-DB: Os06t0728000-01
Position
chr06:join(30993516..30993559,30993679..30993792,30993872..30993929,30994087..30994131,30994231..30994311,30994399..30994509,30994808..30994828)
AA seq 157 aa
MKGAKSKGAAKPDAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF
KEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNKGESTAKKA
PAKEEEEDDEEESDKSKSEVNDEDDDEGSEEDEDDDE
NT seq 474 nt   +upstreamnt  +downstreamnt
atgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtgaagagt
aagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggaccccaac
aagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaaggagttc
aaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtgatagg
tggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagctcaag
gccgagtacaacaaggccattgctgcctacaacaagggcgagagcactgccaagaaggca
cccgccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtc
aatgatgaggatgacgacgagggcagcgaagaggatgaagacgatgacgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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