KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os07t0105100-00
Entry
Os07t0105100-00   CDS       T02163                                 
Symbol
Os07g0105100
Name
(RAP-DB) Similar to DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide.
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020  RNA polymerase
dosa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Os07t0105100-00 (Os07g0105100)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Os07t0105100-00 (Os07g0105100)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os07t0105100-00 (Os07g0105100)
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os07t0105100-00 (Os07g0105100)
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Os07t0105100-00 (Os07g0105100)
  RNA polymerase III system
   RNA polymerase III
     Os07t0105100-00 (Os07g0105100)
  RNA polymerase I system
   RNA polymerase I
     Os07t0105100-00 (Os07g0105100)
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Os07t0105100-00 (Os07g0105100)
SSDB
Motif
Pfam: DNA_RNApol_7kD DUF5816 A2L_zn_ribbon Zn-ribbon_8 zf-Mss51
Other DBs
RAP-DB: Os07t0105100-00
Position
chr07:complement(join(294420..294492,293867..293959,292876..292898))
AA seq 62 aa
MQHDPSSPAPMDPQQPKPVSYLCTDCGTETLLKPTDVVQCHECGCRILCKKRTRQVVQYE
AR
NT seq 189 nt   +upstreamnt  +downstreamnt
atgcagcacgaccctagctcaccggcaccaatggatcctcagcagccgaaacccgtcagc
tatctatgcacagattgtggaactgagaccttactcaaaccgactgatgttgtccagtgc
catgaatgtggctgtcgcatcctctgcaagaagcgaacccgccaagttgttcagtatgaa
gcgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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