KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0295300-01
Entry
Os08t0295300-01   CDS       T02163                                 
Symbol
Os08g0295300
Name
(RAP-DB) Similar to Threonyl-tRNA synthetase, cytoplasmic (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS).
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Os08t0295300-01 (Os08g0295300)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dosa01007]
    Os08t0295300-01 (Os08g0295300)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dosa03016]
    Os08t0295300-01 (Os08g0295300)
Enzymes [BR:dosa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     Os08t0295300-01 (Os08g0295300)
Amino acid related enzymes [BR:dosa01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   Os08t0295300-01 (Os08g0295300)
Transfer RNA biogenesis [BR:dosa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Os08t0295300-01 (Os08g0295300)
 Prokaryotic type
    Os08t0295300-01 (Os08g0295300)
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon TGS tRNA_SAD
Other DBs
RAP-DB: Os08t0295300-01
Position
chr08:complement(join(11897094..11897428,11896316..11896553,11896091..11896150,11895910..11895999,11895624..11895699,11895171..11895298,11894999..11895088,11894411..11894499,11894221..11894317,11894020..11894106,11893832..11893916,11892333..11892427,11892200..11892232,11891788..11891874,11890751..11890843,11890091..11890183,11889791..11890012,11888713..11888784,11888392..11888463,11888083..11888178))
AA seq 745 aa
MLVCLRRRGLSLLRQRPPRPFPPLPRPRSSPPRVASLRPLSAAAMGENSAAAAGKGKEAK
GKATTSASASAPNVEPDVAYLEAVTQKRIRQFEEIQAKQALERLNIGGEPIRITLPDGAV
KDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPLEGDCELKLFKFDSNEGRDT
FWHSSAHILGESLERAYGCKLCIGPCTTRGEGFYYDAYYNDLTLNETHFGIIDAQAQKAV
AEKQPFERIEVSRAEALEMFAENKFKVEIINELPEDKTITVYRCGPLVDLCRGPHIPNTS
FVKAFACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHLLEEAKKRDHRLLGQTQ
DLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLSPNIYNMQLWETSGHAA
NYKENMFVFEIEKQEFGLKPMNCPGHCLMFEHRVRSYRELPLRMADFGVLHRNELSGALT
GLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYEIFGFKYELELSTRPEKYLGDIE
TWNKAEQQLTEALNEFGKPWQINEGDGAFYGPKIDIGVFDALKRKFQCATLQLDFQLPLR
FKLTYSAEDEAKLERPVMIHRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSISSNS
VEYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRVR
DKAELATVSIDDIITRFKEEVAAYK
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgctcgtctgcctccggcgacgaggcctctcgctcctccggcagcgcccgccccgcccc
ttcccccctctcccgcgcccgcgcagcagcccaccccgcgtcgcctccctccgccccctc
tccgccgcggcgatgggggagaactccgccgccgccgccgggaaggggaaggaagcgaag
gggaaggcgacgacctcggcctcggcctcggcaccgaacgtcgagcccgacgtggcctac
cttgaggcggtgacgcagaagcggatccggcagttcgaggagatccaggccaagcaggcc
ctcgagcgcctcaacatcggaggcgagcccatcaggataactttgccagatggtgcagtc
aaggacggaaagaaatggatctcaacccctatggatattgctaaggagatatcaagtgga
ttagcaaatagctgcttgatagctcaagtgaatggaacactgtgggatatgacgaggcca
ctggaaggtgattgtgaattgaagttgttcaagtttgatagcaatgaagggcgtgacacc
ttctggcactcaagtgctcatattcttggagaatctcttgagagggcatatggctgcaag
ctgtgtattgggccatgtactacaagaggggagggtttctattatgatgcctactacaat
gatctgacattgaatgagacacattttggtatcattgatgcccaagcacagaaagctgtt
gcggaaaaacaaccatttgaacgaattgaggtctccagggcagaggcccttgaaatgttc
gcagaaaataaatttaaggttgaaatcattaatgagttgcctgaagacaagaccattaca
gtatacagatgtggtcctctagttgacctttgccgtgggccacacatccccaatacttcc
tttgttaaagcttttgcttgtcttaaggcatcatcgtcgtattggagagggaaagcagat
cgagagagcctgcagagagtatatggaatttcttttcctgattctaaacgtctcaaggaa
tataaacatctgctagaagaggctaagaagcgtgatcataggctattaggacagacccag
gatctcttctttttccatcaacttagtccaggaagctgcttcttccttccacatggtgct
ataatatacaacaaattgatggattttttgcgacagcaatacagagatagaggatatcaa
gaggttttgagcccaaatatttacaatatgcaactctgggaaacctctggacatgctgca
aactacaaggagaatatgtttgtttttgagattgagaaacaggaatttggtctcaagcca
atgaattgtcctggccattgcctaatgtttgagcacagggttcgttcatacagagaattg
cctctccggatggctgattttggagtccttcacaggaatgagcttagtggtgcacttaca
ggtttgacacgtgttagaagattccagcaggatgatgcccatattttttgcagagaaagc
caaatcaaggacgaagttaaggctgttttggacttcatcaattatgtttacgagatattt
ggatttaaatatgaattggagctatcaacgagaccagaaaagtacttaggtgatattgaa
acctggaacaaagcagagcaacagctgacagaagccttaaatgagtttggaaagccatgg
cagatcaatgaaggtgatggtgccttctatggtccaaaaattgatattggtgtgtttgat
gccctcaagaggaaatttcagtgtgcaactctacagctcgattttcagctgcccctacgc
ttcaagctgacttactctgcagaggatgaagccaaacttgagaggcctgtgatgattcac
agggcaatcctaggttctgttgaaaggatgtttgctattcttttggagcattacaatggt
aaatggcccttgtggttgagtcctcgccaagccattgtttgctccatatcttccaattca
gtggaatacgctaaacaggtccgtgctaggatacatgaagctggttttcatgtagccatc
gatgagacagacaggacaatacagaagaaggtacgggaggctcaattagcccaattcaac
tacattcttgtcgttggtgcacaagaagcagagactggacaggtcagcgtcagggtaagg
gacaaagctgaactagccacagtgagcattgatgacatcatcacacgttttaaggaggaa
gtagcagcttacaaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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