KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0513300-01
Entry
Os08t0513300-01   CDS       T02163                                 
Symbol
Os08g0513300
Name
(RAP-DB) Helix-hairpin-helix motif, class 2 domain containing protein.
  KO
K17413  small subunit ribosomal protein S35
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dosa03011]
    Os08t0513300-01 (Os08g0513300)
Ribosome [BR:dosa03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Os08t0513300-01 (Os08g0513300)
SSDB
Motif
Pfam: MRP-S28 MgsA_C DUF2408
Other DBs
RAP-DB: Os08t0513300-01
Position
chr08:join(25444582..25444744,25445225..25445623,25448440..25448857,25449595..25449784)
AA seq 389 aa
MRRLVTHLHRLSHRAIPSPPPSRPPTTTSLPFLLSRRLLSDDAAPPPAADVPNKELKRRL
ETYYGVDDEAELPSVTEAVLERKLADVHSETDDELIEELRSKPLPEVRDRDFESDFEEMH
DTDEELDNLYNARQYVEKKIKSDEFFNMDDDKWNKMIKKAVDNGHLGNMNECENILEDML
HWDKLLPDEIKKKVEAKFNELGDMCEKGELEPEQAYELFKEFEDKMVSECTELMEAENPT
DVDEFSKMENKSVKLDDPPGEGPVLRWESRIVFAPGGDAWHPKNRKVKLSVTVKELGLSR
HAFRRLREVVGNRYNSGKDELTITSERFEHREENRKDCLRTLYAVVEDANKANKLADDAR
NAYVKNRLKANAQFMERLKVKTQKLRVAA
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgaggcgcttggtgacgcacctccaccgcctctcccaccgcgccatcccttccccgcct
ccatctcgacccccaaccaccactagcctccccttcctcctctcccgccgcctcctctcc
gacgacgccgcgcctccgcccgccgccgacgtcccaaacaaagagctgaagcggcggttg
gaaacttactatggggtggacgatgaggcagaactaccatctgtcacagaggctgttctt
gagcggaagcttgcggatgtgcacagcgagacggacgatgaacttatcgaggagctgcgc
agcaaaccactccctgaggttcgtgacagggattttgagtccgactttgaggagatgcac
gatactgatgaggagctggacaacttgtacaacgccagacagtatgtggagaaaaagatc
aagagtgacgagttctttaatatggatgacgacaagtggaataagatgatcaagaaggct
gtggataatggccacctcggtaatatgaacgaatgtgagaatattttggaggacatgctc
cactgggacaaactattacctgatgaaattaaaaagaaggtggaggccaaatttaatgag
ttgggggacatgtgtgagaagggagagcttgaacctgagcaggcttatgaattattcaaa
gagtttgaggataagatggtttcagagtgcacagaactaatggaagctgagaacccaact
gacgtggatgaattttctaaaatggaaaataagagtgttaagttggacgatccacctggt
gagggacctgttctaaggtgggagtcacgtattgtctttgctcctggaggtgatgcatgg
catcccaaaaacaggaaagttaaactcagtgtgactgtcaaagagctgggactttcacga
catgccttccgacgtttacgtgaggttgttgggaataggtacaattctggaaaagatgaa
ctcacaataactagtgaaaggtttgagcatcgggaagagaacaggaaagattgcttgagg
acattgtatgctgtagtagaagatgcaaacaaggccaataagttggctgatgatgctaga
aatgcatatgttaaaaacagacttaaggccaatgctcaattcatggaaaggttgaaggtg
aagacacagaaattgagggtagctgcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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