KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os09t0281900-01
Entry
Os09t0281900-01   CDS       T02163                                 
Symbol
Os09g0281900
Name
(RAP-DB) Thyroid hormone receptor-associated protein complex component TRAP170- like protein.
  KO
K15156  mediator of RNA polymerase II transcription subunit 14
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os09t0281900-01 (Os09g0281900)
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Tail
     Os09t0281900-01 (Os09g0281900)
SSDB
Motif
Pfam: Med14
Other DBs
RAP-DB: Os09t0281900-01
Position
chr09:complement(join(6048646..6048894,6046579..6047652,6045107..6045204,6043987..6044161,6042615..6043416,6040988..6041964,6039855..6040906,6038316..6039111))
AA seq 1740 aa
MAEGELGQQTVELGAVVRRAAEESYLSLRELVEKSQDEGEGKGGAYGARQRSDSEKKIDL
LKFIARTRQRMLRLHVLAKWCQQVPLVNYCQQLGSTLSSHETCFTQTADSLYFMHEGLQQ
ARAPMFDIPSALEVMLTGNYQRLPLCIEDIGSQNKLSPDEEKRALQKLNASVRYKVLVTP
RPKEVSNVSVADGIAVFRVDGEFKVLLTLGYRGHLDLWRILHLEVLVGDKGGPIKLEERR
RFALGDDIERRMAVSENPFMVLYAILHELCISLAMDTIIRKTNVLRQGRWKDAIRSELVL
DSTTGQTGSAPLMQLGQDGEYDLSGSRIPGLKINYWLDEKAGGSAESDSSPFIKIEARQD
MQIKCQHSSFILDPLTDKEANLSLDLCCIDVEQLILRAIASNRHTRLLDIQRQLSKNVQI
SQSPKDVILKRDVEIAKDPVKKTEQKDFADCCGNEVLQVRAYGQAYIGLGINIRSGRFLL
QSPENILPPSALLDCEEALNKGSITATDVFASLRTRSILHLFAATGSFFGLKVYEKSQGT
LKIPKDILHGSDLMVMGFPQCANAYYLLMQLDKDFRPVFHLLETQSDANDKTNTNACTKE
ALRFNKIDIGQIQISKSESNTNMFDAKLHALQNIGNCDDVMENRLPIQSGIEPLPLLPAC
SPSFSSVVDEVFEYEHGALAVPNHSLPQTTLQSTSHPGSLSVGFQGVGTRANASIEGASS
AYSGSKFSPGVGLNSYLPSNLRHVQSTNAFSSSTVTKSSSIKLPSSNSNHELSSLSSPTE
HVIADGSKSLQLVPASKINGSINLITMGSDGASRKRSISDLFLNLPSLQGLKPSSPRKRR
RISESMESWSPLQAYSSDSQSRTSLTYGNILAERNNCVPATTYASVLLHVIRHCSLSIKH
AQITAQMDSLAIPYVEEVGLRSPSSNLWLRLPFARDDSWKHICLRLGKAGSMSWDVRIND
PHFRELWELSTGSTTTSWGVGVRVANTSEMDSHISFDAEGVILTYSNVEPDSVQKLVSDL
RRLANARSFARGMRRLIGVKLNDKLDDDQTSTDIKSQPVNKGNSDAADRLSEQMRKTFRI
EAVGLMSLWFSYGTMPMVHFVVEWESAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFL
DCIRLTAGPLLALGGAIRPARMPVTVSSGYNSMPKQMNNIPTQGPLANGSSSTTMHHAPS
PANVAATHLGSHNLHTAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSV
DMRCFAGDQVWLQPATPPKGGPLVGGSLPCPQFRPFIMEHVAQGLNALEPSFMNATQAGA
HLNSSAGTLQPAPNANRVNATQGIGMSRPASGVANHVAANLSRAGNAMLASSGLASGIGG
ASVRLTSGANLPVHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFA
QLPELLKEILGSILKENEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFH
HQQQQQQAQNSAQEELAPPEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFL
KLIAWKKGFSQAHGDMATAQRARIEICLENHSGSVSDDITESTLAKSNVKYDRAHSSLEF
ALTFVLDHALIPHMNVAGGAAWLPYCVSVRLKYSFGESNHIAYLAMDGSHGGRACWLQYE
DWERCKQKVARAVETVNGSVAVGESGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS
NT seq 5223 nt   +upstreamnt  +downstreamnt
atggcggagggggagctggggcagcagacggtggagctgggcgcggtggtgcggcgggcg
gcggaggagtcgtacctctcgctgcgggagctcgtggagaagtcgcaggacgagggcgag
gggaagggtggcgcctatggcgcgcggcagcggtccgactccgagaagaagatcgacctg
ctcaaattcatcgcccgcacccgccagcgcatgctccgcctccatgtccttgccaaatgg
tgccaacaggttccattggttaattattgtcaacagcttggatcaactctctccagccat
gaaacatgtttcacacaaacagctgattcgctgtactttatgcatgaggggttgcagcaa
gctcgagctcctatgtttgacatcccttctgctttagaagtcatgcttacaggaaactat
caaagattgccattatgtatagaagatataggaagccaaaataaactttctccggatgaa
gagaagcgtgctttacagaagttgaatgcaagcgtgcggtacaaagttcttgtgactcca
agacccaaagaagtttctaatgtttcagtagctgatggaatagctgtttttcgtgtggat
ggagaatttaaagttcttcttacacttggttatcgtggccacttagatttatggaggatt
ttgcatttagaggtacttgttggtgacaaaggcgggcctattaagctagaagagaggagg
agatttgcacttggtgatgatatagaaagacgaatggcagtttctgagaatcccttcatg
gtgctgtatgccatacttcatgagttgtgcatctcacttgctatggacactatcattagg
aagaccaatgttcttcggcagggaaggtggaaagatgcaataagatctgagcttgtctta
gatagcaccacagggcaaactgggagtgctcctctaatgcagcttggtcaggatggggaa
tatgatttgagtggttctaggatacctggcctaaaaataaattactggcttgatgaaaaa
gctggtggctcagcagaatctgattcatcaccatttatcaaaattgaggccaggcaagac
atgcagataaagtgccagcatagttcgtttatacttgatcctttgacggataaagaagcc
aatctttctcttgatctgtgttgcattgatgttgaacagctcattttgagagcaattgct
tctaataggcacactcgtcttcttgatatccagagacagctgtccaaaaatgttcaaatt
tctcagtcaccaaaagatgttatcctcaaacgagatgttgaaatagcaaaggacccggtg
aagaaaacagagcaaaaggattttgcagattgttgtggaaatgaggtgcttcaagtgagg
gcctatggtcaagcatatattggtcttggaataaatatcaggagcggtcgtttcctcctc
cagtcgccggaaaacatcttacccccttctgcactgctagattgtgaagaagctctaaat
aaagggagtattacagctactgatgtttttgcaagcttaagaaccaggagcatcctccac
ctatttgctgctactggaagtttttttggccttaaggtttatgagaagtctcaaggtact
ctaaagattccaaaggacatattgcatggttcagacctgatggtgatgggatttccacag
tgtgcaaatgcctattatctattgatgcaacttgataaggacttcaggcctgtttttcat
ttgcttgagacacaatctgatgcaaatgataagacaaacacaaatgcatgcacaaaggaa
gctttgaggtttaataagattgatattggacagatacagattagtaaaagtgaatcgaat
acaaatatgtttgatgcgaagctgcatgccctacagaatatagggaattgtgatgacgta
atggaaaatagactccccattcaaagtggcattgagcctcttccactgctgcctgcttgt
tcaccatcgttctcttctgttgttgatgaagtttttgaatatgaacacggggctcttgct
gttccaaaccattctttgccgcaaactactttgcagtctacctctcatccaggttctctt
tctgttggttttcaaggagtaggtactagagctaatgcatcaattgaaggggcctcatca
gcttacagtggatcaaaattttctcccggggttggtttgaacagttatttaccaagtaat
ttgagacatgtacaaagtacaaacgccttttcctcaagcactgtaacaaaatcatcttca
atcaagttgccaagttctaattctaatcatgaactgagctcattgagctctccaactgaa
catgtgattgctgatggaagtaaatcacttcagctcgtccctgcaagcaagattaatgga
tcaatcaaccttatcactatgggctctgatggtgcatctagaaagcgttctatttcagat
ttatttctgaacctcccttcattgcaaggattgaaacccagtagcccaaggaagcgaaga
agaatatcagaatcaatggagagttggtctcctttgcaagcatattcatcagactcacaa
tcaagaacaagcctcacctacggaaatattctggctgaaagaaataattgtgtcccagca
actacatatgcttcggtgctactacatgtcataagacactgttcattgtccattaaacat
gctcaaataactgcccagatggattctcttgccattccatatgttgaagaagtgggctta
cgatcaccatcctctaatctttggctaaggttaccttttgctcgggatgattcttggaaa
cacatatgcttacgcctcggcaaggctggaagtatgtcttgggatgttaggataaacgat
ccacattttagggaactctgggagctaagtacaggaagcaccacaacctcatggggtgtt
ggtgttcgtgtcgcaaacacctctgagatggattcgcatatctcttttgatgcagaaggt
gttattttaacttacagcaatgttgaaccagacagtgttcagaagcttgtgtcagatcta
cgaaggcttgcaaatgcccgttcatttgcccgtggaatgaggagattgattggtgtcaaa
cttaatgacaagctagatgatgatcagacatctacggatataaagtcgcagcctgttaat
aagggtaatagtgatgctgcagacaggctatctgaacaaatgagaaagactttcaggatt
gaagctgttggcttaatgagcttgtggttcagttatggcacaatgcctatggtacacttt
gttgttgagtgggaaagtgctaagggaggctgcacaatgcatgtttctcctgatcagctt
tggccacacacaaagtttttggaggatttcgtgaacggtggtgaggtagcatccttcctg
gactgcattcggctgacagcagggcctttgcttgcccttgggggtgcaattcgtccagca
agaatgcctgtaacggtttcttctggatacaactccatgccaaagcagatgaacaacatc
cccacccagggaccattagcaaatggttcatcatcaacaaccatgcatcacgcaccttcc
cccgcaaatgttgctgccacccatttgggaagtcataatctccacactgctgcgatgctt
tccgctgctggacggggtgggcctggacttgttcctagttctttgctgccctttgatgtt
tctgttgtgctccgtgggccatactggatacgcattatatatcggaagaaattttctgtt
gacatgcgctgtttcgctggggatcaggtttggctacaaccagcaactcctcctaaagga
ggacctctggttggtggatcgttgccgtgcccacaatttcgaccattcataatggaacat
gttgctcagggtctaaatgctcttgaacccagtttcatgaatgctacacaggccggtgcg
catttaaatagcagtgctggaactctgcaacctgcacccaatgcaaatcgtgtaaacgcg
actcaaggtattggtatgtccaggcctgcttctggagttgctaaccatgtagcagccaat
ttgagtcgagcaggtaatgccatgttggcctcttcaggacttgcttcagggattggtggg
gcctctgtgcgactaacatctggagctaacctccctgttcatgtgaaaggagagctgaat
acagctttcattgggcttggggatgatggtggctacggtggtggttgggttcctttggca
gctctcaagaaggttttaagagggatcctcaagtaccttggagttctatggttgtttgca
caattgcctgaacttctgaaagagatactggggtcgattttgaaggaaaatgagggtgct
ctcttgaatttggatcaagagcaacctgcactccggttctatgtgggaggttatgtattt
gcagttagtgttcatcgggttcaattgcttctacaagttttaagcgtcaagcgattccat
caccagcaacagcagcagcaagctcagaacagtgcacaggaagagctagctccacctgaa
atcaacgagatatgtgattatttcagcaggcgtgttgcctctgaaccatatgatgcttcc
agagttgcttcatttatcactttgcttacactaccgatttcagtgctgcgagaattttta
aaactaattgcttggaagaaaggtttctcccaggctcatggggacatggccactgctcag
agagcccggattgagatttgtctggaaaatcattcagggtcagtttcagatgatatcaca
gaaagcactttggctaagagcaatgttaagtatgatagagcccacagttctctagagttt
gctctgacctttgtacttgatcatgctctcattcctcatatgaatgtagctggcggagct
gcctggcttccgtattgtgtatccgtacgactaaagtattcttttggggaaagcaaccat
atagcataccttgcaatggacggtagccatggtggcagagcttgctggttgcaatacgag
gactgggaaagatgtaagcagaaggtcgccagggcagtggagactgtgaatggctctgtt
gcggttggagaatcaggccaaggaagattgcgaatggtcgccgagatgatccaaaagcaa
cttcagctctgtcttcagcagctgagagatggtcctctttctgctggctcaactgcatca
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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