KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os11t0130100-01
Entry
Os11t0130100-01   CDS       T02163                                 
Symbol
Os11g0130100
Name
(RAP-DB) Conserved hypothetical protein.
  KO
K15559  regulator of Ty1 transposition protein 103
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os11t0130100-01 (Os11g0130100)
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Os11t0130100-01 (Os11g0130100)
SSDB
Motif
Pfam: ALIX_LYPXL_bnd CID
Other DBs
RAP-DB: Os11t0130100-01
Position
chr11:complement(join(1386259..1386291,1385964..1386137,1385697..1385853,1384323..1384462,1384189..1384224,1382287..1383159))
AA seq 470 aa
GEDGKKVVGRLIDIWDERKVFGTRIESLKDDILGGSTHTMGNNGNSSNPSSHPSSVSKAV
RKDSGTVTKKLTIGGMPEKIVTAYQSVLDQHFDEDTALNKCNNAVSVLERMDKDVDDACT
QGIQQGSSLISDLQGQETVLKQCIEQLESVNMARITLINKLREALSEQEAKSELLRNQLH
VARAKAEHAMQLKQRLGSALNNGAGSSSSPLMVTLPPGQTAAMMQNSAAMPIFPHYQPLH
PATSLPATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSGDLS
AGPPGFESNKKPRLDNPIHVSDMGAPPFFGQVPQVQPQIGATAALGGTQPPTQANQATGS
FPPPPPPLPLMPQFVQNTGGMFGMGPFGMVSGSAPPPPLLPNIMSAGFPRLSAPPPLPLP
TQPQNQSQPQQQQSPQAPQQSPTSTGFFQPPGAGFFPPVQVQQSPSAQRQ
NT seq 1413 nt   +upstreamnt  +downstreamnt
ggagaagatggaaagaaagtagtcggaagattaatagatatttgggatgaacggaaggtc
tttggaacccgtattgaaagtctgaaagatgacattcttggtggtagcactcatacaatg
ggtaacaatggcaatagctcaaatccaagctctcacccctcttcagtttccaaagctgtg
cgaaaagattctggtacagtaacaaaaaaacttactattggcgggatgccagaaaagatt
gtaacagcatatcagtctgtgcttgatcaacattttgacgaagacacagctttaaacaaa
tgcaataatgctgttagtgttttggaaaggatggataaagatgtagatgatgcttgtacc
caaggtattcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtcctt
aagcagtgcattgagcaacttgaaagtgtcaacatggctagaataaccctaatcaataaa
ctaagagaagccctcagcgaacaggaagcaaagtcagagcttcttcgcaatcagttgcat
gtagctcgagcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtgccttg
aacaatggtgcaggatctagttctagtccactgatggttacacttccaccaggacaaaca
gctgccatgatgcagaattcagctgcaatgccaatatttccccactatcaaccactgcat
ccagcaacctcacttcctgccacatctagtgctgttggtgatgagcccaaaaaaactgca
gcagctatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccatt
ttctcgtcccttgctgctgaacaagcaaggaatagtggttcgacttctggagatctctct
gcaggacctccaggctttgagagcaataagaagcctaggcttgacaaccctattcatgtg
agtgacatgggtgctcccccattctttgggcaagtaccacaggtgcaaccacagattgga
gcaacagctgctcttggaggcacacagccaccaacacaagcaaaccaagcaaccggttca
tttccaccacctccacctccattaccacttatgccacaatttgttcaaaatactggagga
atgtttggaatgggaccttttgggatggtgagtggctctgcgccgcctccacccctattg
cccaacattatgtcagcaggttttccaagactaagcgcgcctccacctctgcctctgcct
acacaacctcagaaccagagtcagccccagcagcagcagtctccgcaggcaccacagcaa
tcgccgacctcgacaggattttttcaaccaccaggtgctggcttcttcccaccagtgcag
gttcagcaatctccatctgcccaacggcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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