KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os11t0249400-00
Entry
Os11t0249400-00   CDS       T02163                                 
Symbol
Os11g0249400
Name
(RAP-DB) Similar to Polygalacturonase family protein, expressed.
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00040  Pentose and glucuronate interconversions
dosa01100  Metabolic pathways
Module
dosa_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    Os11t0249400-00 (Os11g0249400)
Enzymes [BR:dosa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     Os11t0249400-00 (Os11g0249400)
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix NosD
Other DBs
RAP-DB: Os11t0249400-00
Position
chr11:complement(join(8085768..8086522,8085435..8085690,8085126..8085374))
AA seq 419 aa
MPRRAHAHAAVAAHLLVSAFVAAAAAAAATYNVIDYGAVGDDGGVTDSARAFEAAWAAAC
AGDAAAAAATVVVPAGGVYLVSRARFAGPCRSGAVAVNMTGATVVAPVPYAGVQLWIVFQ
DVDGVSVAGGTLDGRGRALWACRRARRPDCPPATRSLTIYRSRNVAVRGLTSRDSAGIHI
TVQASAGVAIVDTVVSAPGRSPNTDGIHIKQSTGVTVRNAVIGTGDDCVSMVEGSSDVLI
EAVTCGPGHGISIGSLGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAKANAGAVAGVSF
SGVVMRNVSNPIIVDQNYCPGNASCPTEARSPETCDLGSGIEISGVSYTDIEGTSATATA
VRFDCSPSRPCAGIAMRDVRLRYQPPAAAAEEEQPAASFCRNAHGVAFGDVDPPSCLTE
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgccgcgccgcgctcatgctcatgccgccgtcgccgcgcacttgctggtgtcggcgttc
gttgcggcggcggcggcggcggcggcgacgtacaatgtcatcgactatggcgcggtgggc
gacgacggcggggtgacggacagcgcgcgggcgttcgaggccgcgtgggcggcggcgtgc
gcgggcgacgcggcggcggcggcggcgacggtggtcgtgccggcgggcggggtgtacctg
gtgtccagggcgaggttcgccgggccgtgccggagcggcgcggtggccgtgaacatgacg
ggcgccacggtggtcgcgcccgtgccgtacgccggcgtgcagctgtggatcgtgttccag
gacgtggacggcgtgtccgtcgccggcgggacgctggacggccgcggccgcgcgctctgg
gcgtgccggcgcgcacgccgccccgactgcccgcccgccacgaggtcgctgacgatatac
cggtcgaggaacgtggcggtgcgcgggctgacgtcgcgggacagcgccgggatccacatc
accgtgcaggcgagcgccggcgtggcgatcgtggacacggtggtgtcggcgccggggcgc
agccccaacaccgacggcatccacatcaagcagtccaccggcgtgaccgtccgcaacgcc
gtcatcggcaccggcgacgactgcgtctccatggtcgagggctcctccgacgtcctgatc
gaggccgtcacttgcggccccggccacggcatcagcatcgggagcctgggggacacgccg
gagcaggtggcggtgcggaacatcaccgtgaagggcgcggcgctcgccgggacgacgaac
gggctgcggatcaagacgtgggcgaaggcgaacgccggcgcggtcgccggcgtctccttc
tccggcgtcgtcatgcggaacgtcagcaacccgatcatcgtcgaccagaactactgcccc
ggcaacgccagctgcccaaccgaggcacgcagccctgaaacctgtgacctcgggtcgggg
atcgagatcagcggcgtgtcgtacacggacatcgaggggacgtcggcgacggcgacggcg
gtgaggttcgactgcagcccgagccggccgtgcgccgggatcgccatgagggacgtccgg
ctgaggtaccagccaccggcggcggcggcggaggaggagcagccggcggcgtcgttctgc
cggaacgcgcacggggtggcgtttggggacgtcgatccaccgagctgtctaaccgagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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