KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0168700-01
Entry
Os12t0168700-01   CDS       T02163                                 
Symbol
Os12g0168700
Name
(RAP-DB) AMP-dependent synthetase and ligase domain containing protein.
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00061  Fatty acid biosynthesis
dosa00071  Fatty acid degradation
dosa01100  Metabolic pathways
dosa01212  Fatty acid metabolism
dosa04146  Peroxisome
Module
dosa_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Os12t0168700-01 (Os12g0168700)
   00071 Fatty acid degradation
    Os12t0168700-01 (Os12g0168700)
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    Os12t0168700-01 (Os12g0168700)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:dosa01004]
    Os12t0168700-01 (Os12g0168700)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dosa04147]
    Os12t0168700-01 (Os12g0168700)
Enzymes [BR:dosa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Os12t0168700-01 (Os12g0168700)
Lipid biosynthesis proteins [BR:dosa01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Os12t0168700-01 (Os12g0168700)
Exosome [BR:dosa04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Os12t0168700-01 (Os12g0168700)
  Exosomal proteins of breast cancer cells
   Os12t0168700-01 (Os12g0168700)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
RAP-DB: Os12t0168700-01
Position
chr12:join(3484878..3485327,3486024..3486104,3486195..3486467,3486648..3486779,3486856..3487029,3487117..3487346,3487515..3487632,3487901..3488032,3488142..3488276,3488346..3488552,3488725..3488889)
AA seq 698 aa
MNPYFVGLLVPIAVSLLLRKRRMVGKMRALPVDVGGEPGYAIRNYRFKQPVETHWEGVTT
LAELFEQSCKDYVNMPLLGTRKLISREQESSLDGRSFEKLHLGEYDWKCYAEVFKSVCNF
ASGLIRLGHQKTDRVAIFAETRAEWQIALQACFRQNITVVTIYASLGEEALCHSLNETEV
TTVVCGQKELKKMIDISGQLDTVKRVIYINEEGISAEVSLAQKSTSWIIEPFEDVGRLGD
TAPVDANMPLPSDVAVIMYTSGSTGLPKGVMMTHRNVLATLSAVMTIVPEIGKKDVYLAY
LPLAHILELAAEALIAAVGASIGYGSPLTLTDTSNKIKKGTLGDASALKPTLMTAVPAIL
DRVRDGVRKKVDTKGGVAKQLFDVAYNRRLAAVNGSWLGAWGLEKLLWDMLVFKKVRAVL
GGKIRFVLSGGAPLSGDTQRFINICLGVPIGQGYGLTETCAGGTFSEYDDPSVGRVGAPL
PCSYIKLIDWSEGGYLTSDSPMPRGEIVIGGPNVTKGYFKNEAKTNEVYKDDEKGMRWFY
SGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYVENIMIHADPFHSYC
VALVVAAHNELENWASQQGVTYTDFVDLCQKPEAVKEVLGSLSKAAKQARLEKFEIPAKI
KLISEPWTPESGLVTAALKLKREVLRKTYEDDLAKLYA
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgaacccttattttgttggtcttctcgtcccaattgcggtatctcttctcctacggaag
aggagaatggttgggaagatgagggcactgccagttgatgtgggtggagagcccgggtat
gcaatccgcaactatcgattcaagcaaccggttgaaactcactgggaaggtgtcaccacg
ctcgccgagttgtttgagcagtcctgcaaggattatgtcaacatgccgctcctcggcacc
aggaagctcatctccagggaacaggaatcatcactagatgggaggtcctttgagaagctt
catcttggagagtatgactggaagtgctacgctgaggtattcaagagtgtttgcaacttc
gcatctggactaattcggctaggccatcagaagactgatcgtgttgctattttcgccgag
acgcgggctgagtggcaaattgctctgcaggcatgcttcaggcaaaatattacagttgtc
acaatctacgcctccttgggagaggaagcactgtgccactcactaaatgagacagaggtt
actactgttgtatgtggtcagaaagaactgaaaaaaatgattgatataagtgggcagctt
gacacagtaaagcgagttatctatatcaatgaggaaggaatctcagctgaagtttcttta
gctcaaaaaagcactagctggataattgagccgtttgaggatgtaggtagattgggagat
acagcacctgttgatgcaaacatgcctctcccatctgacgtagcagtgataatgtataca
agcggtagcaccggattgcctaagggagtaatgatgacccatcggaacgtcctggctaca
ctttcagcagttatgaccattgtgcctgaaattggtaaaaaggatgtatacctggcctac
ctgccacttgcacacattcttgagttggcagctgaggcactcatagctgctgttggggct
tccataggatatggatcacccttgaccctgactgatacatcaaacaaaataaaaaaggga
acactgggtgatgcttctgcactcaagccaacactgatgaccgctgtacctgctatactt
gatcgtgttcgtgatggtgtgagaaagaaggtggatacaaagggtggtgtagcaaagcag
ttatttgatgttgcctataatcgtcgacttgccgcagtcaatggaagttggctgggtgca
tggggattagagaaactcttgtgggatatgcttgtcttcaaaaaggtgcgagcagttttg
ggaggaaaaattcgctttgtactttcaggtggagcacctctatcaggagatacccagaga
tttatcaatatatgccttggggttccaatagggcaagggtatggtcttactgagacatgt
gctggaggaacattttctgagtatgatgacccatctgttggtcgcgttggtgctccacta
ccttgttcgtacattaagctgattgactggtcagaaggtggatacttaacaagtgactcc
ccaatgcctcgaggagagattgtcattggtggtcccaatgtaactaaaggctatttcaag
aatgaagctaaaacaaatgaagtctataaggatgacgaaaaaggtatgcgatggttctat
tctggtgacatcgggcgcttccacccagatggctgccttgaaatcattgaccgtaaaaag
gatattgtgaagcttcaacatggtgaatatgtgtctctcgggaaggtggaggctgctctg
attgtgagcccatatgtggagaacatcatgatccatgctgatcctttccacagttactgt
gttgcacttgtggtagctgcacacaatgagctggaaaactgggcttcgcagcagggagtt
acatacaccgatttcgtagatttgtgccagaagccagaggctgttaaagaagtgcttgga
tctctatcaaaggctgcgaagcaagcgcgactggagaagtttgagatcccggccaagatc
aagctgatatctgagccatggaccccggagtctggccttgtcactgctgccctcaagctc
aagagggaagtgctcaggaagacatatgaggatgatcttgctaaactatacgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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