KEGG   Desulfosarcina ovata subsp. sediminis: DSCO28_66440
Entry
DSCO28_66440      CDS       T06286                                 
Name
(GenBank) ATP-dependent helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
dov  Desulfosarcina ovata subsp. sediminis
Pathway
dov03022  Basal transcription factors
dov03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dov00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DSCO28_66440
  09124 Replication and repair
   03420 Nucleotide excision repair
    DSCO28_66440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dov03021]
    DSCO28_66440
   03400 DNA repair and recombination proteins [BR:dov03400]
    DSCO28_66440
Enzymes [BR:dov01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     DSCO28_66440
Transcription machinery [BR:dov03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     DSCO28_66440
DNA repair and recombination proteins [BR:dov03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     DSCO28_66440
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII PDDEXK_1
Other DBs
NCBI-ProteinID: BBO86078
UniProt: A0A5K8A139
Position
7634771..7637110
AA seq 779 aa
MKERHQIAVRTLVDYVLRSGDLDMRFTSPGRPLEGIRIHQRIQRQRPEGYRAEVSVSTEV
ETPGLILVVSGRIDGVLETAEATIVEEIKSTSRELGVVGQCPDPCHWGQAKVYACLLARE
KDLPSVTVQLTYCQLDSGEILEQTETCGREELETFFEDLIQRYLKWAKTLSDWRQLRDAT
IGRLDFPFAAYRCGQRSMAITVYRTIRDGGQALIQAATGIGKTLAALFPAVKTIGEGHTD
RIFFLTARNTGKASATKALDLLQTVGLRLKRVCLTAKDHICFNPEAACDAQLCPYAKGHF
DRLTESLEAAFACDNLDRETIETVARAHRVCPFEFSLELSRWADCIVCDYNYAFDPRVYL
KRFFDEENGSYVFLVDEAHNLVDRSREMFSVHLDKNAFLELRRAVKSHLPPVYRAAGKIN
TWMVKAREQTREAGGFQSAASLPDGLDFLLHGFLRAAEKWLAKNQAAPFREIVLECYFRV
NGFLRVWDQFDDSYRTCYQQTGSQLTLKLFCLDPSRHLAVAFKRCRAAVFFSATMTPADY
FQQILGCTPSATRLAIPSPFPRKNLSVFIARGIDTTYARRAESAQRVADLIHSFADSRTG
NYLCFFPSYAYMAMVVERFSTSVKDVVILVQERQMDDADRARFLDQFSARNQQLLVGFAV
MGGIFGEGIDLVGERLCGAVVVGVGLPSICPERDLIRDYFDRWGRGFDFAYRYPGINRVL
QAGGRVIRTDQDRGALLLVDQRFCTYAYRRLLPEHWPAAAIDTQAQLTRHLKQFWTPDA
NT seq 2340 nt   +upstreamnt  +downstreamnt
gtgaaggaacgacatcaaattgccgtccggacgctggtggactatgttctgcgttcgggt
gatctggatatgcggttcacctcgccgggacgccccctcgagggaattcgcattcaccag
cggatccagaggcagcggcccgaagggtaccgggccgaggtcagcgtctccaccgaggtg
gagacaccgggactgattttggtggtgagcgggcgcattgacggcgtactggaaacggcg
gaggcgacgattgtcgaggagatcaagtccacctcccgggagcttggtgttgttggacaa
tgccctgatccatgccattggggtcaggccaaggtctacgcctgtcttttggccagagag
aaggatttgccgtcggtgacggtccagctgacctattgccaactggatagcggagagatt
ttggaacagaccgaaacctgcggtcgtgaagaactggagacgtttttcgaggatctcatc
cagagatacctgaagtgggccaagaccctgtcagactggcggcagttgcgtgatgcgacc
atcggccgactggattttccttttgctgcctaccgctgcggccagcgcagcatggccatt
acggtttaccggaccatccgcgatggcgggcaggcacttattcaagcggccaccggtatc
ggcaagaccctggctgcgctgttcccggcagtcaagacgatcggggagggccatacggac
cggatcttttttttaaccgcccgaaataccggcaaggcatcggccacaaaggcccttgat
ctgctccagacggtggggctccgattgaaacgggtctgcctgaccgccaaggatcatatc
tgttttaatcccgaggcggcctgtgatgcgcagctctgtccatacgccaaagggcatttt
gaccgtctgacagagtcccttgaagcggcctttgcttgcgacaacctggatcgggagacc
attgaaaccgttgcccgtgcccaccgggtctgtccatttgaattttccctggaactgtca
cgctgggctgactgcatcgtctgcgattacaactacgcgttcgatccccgtgtgtacctg
aagcgattttttgacgaagagaacggttcctatgtctttctggtggatgaggcgcataac
ctggtggaccgttcccgtgagatgttctcggtccatctggataaaaatgcgtttctcgaa
ctgcgccgcgccgtcaaatcccatctgcccccagtttaccgggctgccgggaaaatcaac
acctggatggttaaggcccgggaacagacccgggaggctggcggattccaatccgctgcc
agcttgccggacgggctcgattttttgttgcatggatttttacgggcggccgaaaagtgg
ctggcaaaaaatcaagcggccccatttcgagagatagtgctggagtgttatttcagggtg
aacggattcctgcgggtgtgggatcagtttgacgacagttatcggacctgctaccagcaa
accggctctcagctgacgctaaagcttttttgtctggacccgtcgcgacacctggccgtg
gcgtttaaacgctgccgggccgctgtttttttttccgccacaatgaccccggccgattat
tttcagcagatcctgggatgtacgccctcggccacccgtttggcgattccttcgcccttt
ccacggaaaaacctgagcgttttcatcgcccgtggaatcgatacgacctatgcccggagg
gcggagagtgcccagcgggttgcggacctgatccattcttttgccgattccagaaccgga
aactacctctgcttttttccttcctacgcgtacatggccatggtggtcgaacggttttca
acatcagtgaaggatgtggtgatcctggttcaggaacgccagatggacgacgctgacagg
gcccgttttctggatcaattttcggcccggaaccaacagctgctggttggatttgccgtc
atgggagggattttcggagaagggatcgatctggttggcgagcgcctttgcggcgccgtg
gtcgtgggggtcggcttaccgtcgatttgtcccgaacgggacctgatccgcgattatttc
gataggtggggacgggggtttgattttgcgtatcgatatccgggaatcaaccgggtcctg
caggcaggaggacgggtcattcgtacggatcaggatcgcggtgcactgcttctggtggat
cagcgattttgtacctatgcctaccgccggcttttgccggagcattggcccgcggcggcc
atcgatacccaggcacagctgacacgacatctcaaacaattctggacacccgatgcctga

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