KEGG T04899: 109532894

Dendroctonus ponderosae (mountain pine beetle): 109532894

Entry

109532894         CDS       T04899

Name

(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1

K11367

chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]

Organism

dpa Dendroctonus ponderosae (mountain pine beetle)

Brite

KEGG Orthology (KO) [BR:dpa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpa03021]
    109532894
   03036 Chromosome and associated proteins [BR:dpa03036]
    109532894
Transcription machinery [BR:dpa03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     109532894
Chromosome and associated proteins [BR:dpa03036]
Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     109532894
    SLIK complex
     109532894

SSDB

Motif

Pfam:

SNF2-rel_dom CDH1_2_SANT_HL1 Helicase_C CHD1-like_C Chromo ResIII HDA2-3 DEAD Myb_DNA-binding

Other DBs

NCBI-GeneID:

109532894

NCBI-ProteinID:

XP_019753580

EnsemblRapid:

LOC109532894

Position

Unknown

AA seq 1714 aa
MPESGEESDKSGSDSGSSSDSQQNSGSDSGSGSSSSGSGSESGGDNGSDNETLKMNEEYT
QQASQFVSSIPGPSEEQFRSDSSKDHNSEDEDFEPEIRRSARSKREPPRPDGNSKIRTSR
DEWKYNDASSSESDSERERPPPSKRVGARSRATAQKRIVTRKTRYSSDESTDGDSEDEKR
RTVSRRTAAAVSYKEDSEEKTDSEDLVEVDPSELIEPVTEEKCETIERVLAQRRGKKGVT
GNITTCYYVEEHGDLNADVNPNDYENTEYQFLIKWKDWAHIHNTWESEQTLKEQKVKGIK
KLDNYMKKDAEIQKWISYSTPEDVEYYECQLELSQELLKSYNEVERIIAMYNKPDGGTDF
FVKWESLSYAESTWEDSLLIHRKWPQKVQEFQGREQSTKTPTKHCKVLKYRPKFHEVKSQ
PEYMMGKENALVLRDYQIHGLNWMIHSWTKENSVILADEMGLGKTIQTICFLYYLFNTHN
LHGPFLCVVPLSTMTSWQREFAQWAPELNFVTYLGDVQSREIIRQYEWCYDGSKRLKFNA
ILTTYEIVLKDKAFLGSLSWAVLLVDEAHRLKNDDSLLYKALMEFHTNHRLLITGTPLQN
SLKELWALLHFIMPNKFVTWEEFEKDHEHASTKGYSKLHKQLEPFILRRVKKDVEKSLPA
KVEQILRVEMTSIQKQYYKWILTKNYNALRKGVKGSSNTFLNIVIELKKCCNHAFLTKPS
EAEPQYTCQDKLQSLLRGSGKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILAEYLQLRH
FPFQRLDGSIKGDIRRQALDHFNADGSPDFCFLLSTRAGGLGINLATADTVIIFDSDWNP
QNDLQAQARAHRIGQKNQVNIYRLVTARSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVL
NQKASTNNNPFNKEDLTAILKFGAEELFKDEDVDEEPNCDIDEILRRAETRDEAPSMVGD
ELLSAFKVASFAAFDEDATPSPVRTKNENDEESKDWDEIIPENLRKKVEDEERNKEMEDL
YLPPRNRKTLQQINQSESDGDGAEHRKTNKKENDESGSSIEGEESDDERPKRRGRPPVGN
REKIKNFTDAEIRRFVKSYKKFSAPLKRLEAVACEAELQEKPLAELRKLGELLHERCVAY
MNEQSKENNDANNADNQGKKRIRGPSFKLGGVSVNAKTMMQCEEELAALDELLPTNEDER
NKWMLEVRTKPAHFDVEWGAEEDSKLLRGIYVYGIGSWEQIKLDPSLKIGDKVLLNEDKK
PQAKHLQSRAEYLLKLLKKQLDPNKKVQKPKRPRKAKEIKDAKSKEIVDNDFSSNDESTL
HSSQSVSSSTAKKVKVPVVKKEINNDKDAEDVAIKKEKKEKKKAKKEKKSAGPMHFTANN
EPKAINVLGDLDPAIFTECKERMRPVKKALKALDNPDQSMTESEQVQHTRECLIQIGEQI
NTVLGQYTDAEKIKEWRSNLWYFVSKFTEYDAKKLYKLYKKAKAKDAKKAEKKEKLEKKD
RNREQVASTSKEKDRTRKDSDKEPHYHHHHKRKHEPEENNEREERPTKKHRDGTEKRERR
EKHPDKDRKRNREEISTEEEGEYRYNRHRTAPTFRHTAPPVHLEHERWSATGLPRERFPG
EHPKRPFSDYPRVPGYHRGERDYNRGDKRSPDGKIDWRGYSREPRGLLPLSMNQRQFYAG
GFPPGIPPIYPPDGRFSTGEWRTADRDYYRSRPQ

NT seq 5145 nt +upstreamnt +downstreamnt
atgcccgagagtggtgaagaatctgacaagtctggatcagacagtgggagttcatcagat
agtcagcagaattctggctcggatagcggctcaggatcatctagttcaggctcagggtcg
gaaagtggtggtgacaatggttcagataatgagacattaaaaatgaatgaagaatacact
caacaagcttcacagttcgtttcgagtattcctggtccatcagaagagcagtttaggtct
gattcgtccaaagaccacaactccgaggatgaagattttgagccggaaattcgacgttct
gcaagatcaaaacgcgaaccgccgagaccggatggcaacagtaaaattagaactagccgc
gatgaatggaaatataatgatgccagctcttcggagtcagatagtgagagagaacgtccg
cctccaagcaaacgcgtaggcgcaagatcccgagctactgctcaaaaacggatcgtaact
aggaaaactagatatagttcagatgaatctactgatggagactcggaagacgaaaaacgt
cgaacggtttccagacgaacagcagccgcagttagttacaaagaagacagtgaagagaaa
actgattctgaagatttagttgaagttgacccatcagagctaattgaaccagtcacggaa
gaaaaatgtgagaccattgaacgagttttagcacaacggcgaggaaagaaaggagttact
ggaaatataacgacctgctactatgttgaggaacacggggatctaaatgcagacgtaaat
cccaatgattatgaaaataccgaatatcaatttttaataaaatggaaagattgggcgcac
attcacaacacatgggaatctgagcagactcttaaggaacaaaaagttaaagggatcaaa
aagttagacaactatatgaaaaaagatgccgaaatacaaaaatggatcagctactcaacg
ccggaagatgttgaatattatgaatgccaattggaattgtcgcaagagcttctgaaaagt
tataatgaggtggaaagaataattgccatgtacaataaaccagacggaggtactgatttc
tttgtgaagtgggagagtttatcctatgccgagtctacttgggaagactctttattgatt
cacagaaaatggccgcaaaaagtccaggagtttcagggacgtgaacaatcaacaaaaacc
cctacaaaacattgtaaagtgctaaaataccgccctaaattccacgaggtcaaaagtcag
ccagaatatatgatgggcaaggaaaacgcattagttctacgagactatcaaattcatgga
ctgaattggatgattcattcatggactaaggaaaactctgttattttggcagacgaaatg
ggtttggggaaaacgatacagacaatatgttttctttactatttatttaatacccataac
cttcatgggccattcttatgcgtggtacccctttccacgatgacctcttggcaaagagaa
tttgcccagtgggctcctgaattgaacttcgtcacttatttaggagacgtacaatcacga
gaaattattcgtcaatacgaatggtgttacgatggttctaaaaggcttaaattcaacgca
attttgactacctatgaaattgttcttaaggataaagcctttttgggaagtctaagctgg
gcagttttgctagtggatgaagctcatcggctgaaaaatgatgattcgttgttatacaaa
gctcttatggaatttcatactaatcatcgccttttaatcaccgggactcctttgcaaaac
agcttgaaggaactgtgggcgctcttgcatttcatcatgccaaataagtttgtgacgtgg
gaagaattcgaaaaagatcatgaacatgcatctacaaagggctactcaaaactccataag
cagttagagccatttattctgagaagagtaaaaaaagacgtagagaaatcgttacccgct
aaagtagaacaaattcttcgagttgaaatgacttcaattcaaaagcagtattataagtgg
attttaacgaaaaattacaacgctttacggaaaggtgtgaaaggttcatcaaacactttt
ctgaatattgtcattgagcttaagaagtgttgcaatcatgcttttttgacgaaaccatca
gaagctgaaccacaatacacttgtcaagataaattgcaatctttattgaggggttcagga
aagttggttttactagacaagctgttaattcggcttaaggaaacaggacatcgagtgcta
atattttctcagatggtgcgtatgttggacattttggccgaatatctacagttacgacat
tttccattccaaagattagatggtagcattaaaggagatattaggcgccaagcattggat
cattttaatgctgatggctctccagatttttgtttcctcctgtctacgcgtgcgggaggt
ttaggtatcaatttggcgacagccgatacggtgataatttttgattccgactggaaccct
caaaatgatctgcaagctcaagcaagagcacatagaatcggtcagaaaaaccaagtcaat
atttatcgattggtgacagctcgaagtgtcgaagaagagatagtagaacgcgccaaacag
aaaatggtcttagatcatttagttatacagagaatggacactacgggtagaaccgttctg
aatcagaaagcatctaccaataataacccatttaacaaagaagacttaacagcaattctg
aaatttggcgcagaagaattgtttaaagatgaagatgttgatgaagagcctaattgtgat
atagatgaaattttaagaagagctgagactcgggacgaagccccgtcaatggttggagac
gagttactctctgctttcaaagtggctagttttgcagcttttgatgaagatgccactcct
tctccagtacgaacgaaaaacgagaatgacgaagaaagtaaagattgggatgaaattatc
ccggaaaacctcagaaagaaagtcgaggatgaagaaaggaataaagaaatggaagacttg
tacttgccaccgagaaatagaaaaacacttcagcagattaatcagtcagagagcgatggg
gacggcgcagaacacaggaaaacgaacaaaaaggaaaacgatgaatccggatccagtata
gagggtgaggaatcagatgatgagagaccaaaaaggcgtgggcgtccacctgtagggaac
cgcgaaaaaattaagaattttactgacgccgaaattcgcagatttgtaaaaagctacaaa
aaattcagtgctcctttaaaacgtttggaagccgtagcgtgcgaagcagaattacaagaa
aaaccattggcagaattacggaaactgggcgaactgcttcatgaacgctgtgtagcatac
atgaatgaacagagcaaagagaataacgacgcgaacaatgccgataatcaaggcaaaaaa
cggataagaggaccttctttcaagctcggcggtgtatcagttaacgcaaaaactatgatg
cagtgcgaagaagaattagcagcccttgatgaacttttaccaacaaatgaagatgaaaga
aataaatggatgcttgaggtccggacgaaacccgcccatttcgatgttgaatggggtgca
gaagaagattcaaaactactgagaggcatttatgtctatggtattggatcttgggagcaa
ataaagcttgatccctctctcaaaattggtgataaggtcctgttgaacgaggataagaaa
ccgcaggcgaagcacttgcagtctcgagctgagtatctgttgaagctattaaagaagcaa
ctcgatcctaataaaaaggttcaaaaacctaaaagacctcgaaaagctaaagagattaaa
gacgcgaaatctaaggaaatagttgataatgattttagctccaatgatgaatcgacatta
catagtagccagagtgtgagtagttcgacagcgaaaaaggttaaagtacccgttgtcaaa
aaagaaattaataatgacaaagatgccgaagacgttgcaattaaaaaggaaaagaaagaa
aagaagaaggccaagaaagaaaagaagagtgctggaccgatgcatttcactgctaataat
gaaccaaaagccatcaacgtgttaggagacttggaccctgcaattttcaccgaatgtaaa
gagagaatgagaccagtgaaaaaagctttaaaagctttagacaaccctgatcagtcaatg
acggaaagtgaacaagtccaacatactcgggaatgtctcattcagattggggaacaaatc
aatactgtgttaggtcaatacactgatgctgaaaaaatcaaggaatggagaagtaatttg
tggtacttcgtgtcgaagttcacagaatatgacgcaaaaaagttgtataagctttataaa
aaagccaaagcaaaggatgctaagaaagcggagaaaaaagaaaaattggaaaagaaggat
cgaaatcgtgaacaggttgcatcgactagtaaggaaaaggacagaacgcggaaggatagc
gacaaagaacctcactatcatcatcatcacaaaaggaagcacgaaccagaggaaaataat
gagagagaggaaaggccgactaagaaacatcgggatggcactgaaaaaagagaaagacgt
gagaaacatccagataaagaccgtaagcgaaatcgagaagagatcagcactgaagaggaa
ggggaatatcgatacaatcgtcatagaacggcaccgactttcaggcatactgctcccccc
gtgcatttggaacatgaaagatggtctgctactggactccctagagaacggtttcccggc
gagcatcccaaaaggccatttagtgattatccaagagttccaggatatcacagaggagag
cgcgactacaaccgtggagacaagcggtcgcctgatggtaagattgattggcgcggttac
tcccgagaaccaagaggactgcttccattaagcatgaaccaaagacaattctatgcagga
ggtttccctcctggaattcctccaatatacccaccagatgggaggtttagtactggagag
tggcgaactgctgacagagattactacagaagccgaccacagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (193)   
   KEGG ORTHOLOGY (1)   
   RefGene (188)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (212)   

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