KEGG   Dendroctonus ponderosae (mountain pine beetle): 109538594
Entry
109538594         CDS       T04899                                 
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109538594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpa03019]
    109538594
Messenger RNA biogenesis [BR:dpa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     109538594
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A MIOS_WD40 PROPPIN
Other DBs
NCBI-GeneID: 109538594
NCBI-ProteinID: XP_019761459
EnsemblRapid: LOC109538594
Position
Unknown
AA seq 887 aa
MMEFSQPPPNLSMPPPNLAAPPPGVGIPMQHNMGYNHNRQPFRPFMKPLPGPLGNMTLED
FDGKRLRKSVMRKTVDYNSSVIKELETRIWQRDYRDRRAMQPDAMYYPDLMPPPSYPDNP
INCVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDS
PVRTMVWSHNDSWMVTGDHAGFVKYWQSNMNNVKVFQAHKEALRGISFSPSDNKFVTCSD
DGTLRIWDFFRYQEERVLRGHGADVKCVHWHPQKSLIISGSKDNQQPIKLWDPKSGQSLA
TLHAHKSTVMDLKWNANGNWLITASRDHLLKLFDLRNLSQEVQTFRGHKKEASSVAWHPI
HEGLFASGGSDGAIVFWHVGADKEVGAIEQAHDSIVWTLAWHPLGHILCSGSNDHTSKFW
TRNRPGDQMRDKYNLNTQPNGIAGLEDMDLGDEQNNSMIPGMGPEDKVEITALIGDENTA
IPGLDLDSGLLVNEERAKPKKVPFSKPIPRNFQAQWNEATSVETTPGVVPLEKICPNAII
VYGKLIPVEPGSKLEKAISEGPEVLQRYIDSGAIEELQDVIPIRDPDEDDYLRDTNHDEI
ENMHNMNRSSNDMDNHSQYNDEDFRGMDHDIRGFNATGESDIRPFGGDTDFRSHSDMDFR
SNHDFDHRKPLPFRSGPIRPMSGRPITYGVNEMDGPVGLDSPMGGRLPPFGPSPPMGPGR
SMGGATGPDGRRGLLGPPLRGPRSGFDSFGDEDFRPNSRSLEFIEPFDRDDEYDDSNYED
DYNNEFYDEEPSNNSNNWQRNGGNFQSVGFNQRSGGSSSNENWNNAPSQNFRPHGGRGAR
GGGGGGGGNSGKSRKSRKSGISGRGRSARITSAGRRRTPRGGRGRGG
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgatggaattttctcagcctccgcccaatctttccatgccgccccccaatctcgcggcc
ccgccaccgggagtgggcattcccatgcagcacaatatgggatacaaccataataggcaa
ccatttcgaccttttatgaaacccttgccaggtccgttgggaaacatgaccctggaggac
ttcgatggaaagcgcctcaggaagtcagttatgcgtaaaactgtggattacaactcgtct
gttatcaaggaactggaaactagaatatggcagcgagactaccgggataggcgagccatg
cagccagatgctatgtactatccagacctgatgccgcccccgtcttatccggataatccc
atcaactgtgttactacacggtttgtgaaaactgccaccaacaagatgaggtgcccgatt
ttctgcatggcgtggaccccggaaggccgaaggctggttactggagccagctcaggagag
ttcactctttggaatggtctcacttttaattttgaaactattttacaagcgcatgatagt
ccagtgagaacgatggtttggagccacaacgatagctggatggtaaccggcgaccatgca
ggtttcgtgaaatactggcagtcgaacatgaacaacgtaaaagtctttcaggcgcataaa
gaggccctccgcggtataagctttagtccttccgacaacaagttcgtgacgtgttcagac
gatggtacccttcgaatatgggactttttccggtaccaagaagagcgagttttaaggggt
cacggagctgatgtgaaatgcgtgcactggcaccctcaaaagagccttatcatttccggc
agcaaagacaaccaacaaccgatcaagctgtgggacccgaagagcggccaatctttagcg
acgttacacgctcacaaatccactgtgatggacttgaaatggaacgccaatggaaattgg
ttgataaccgcatccagagatcatcttctcaagctgtttgacctgcggaatcttagccaa
gaagtgcagacgtttagagggcacaagaaggaggcttctagtgttgcctggcacccgatt
catgaaggactttttgctagtggaggatcggatggagcaatagttttttggcatgttgga
gctgacaaagaagtgggagcaatagagcaggctcatgatagtatcgtctggaccctcgcc
tggcaccctcttggccacattttgtgttccggatcaaacgatcacactagcaagttttgg
acgcgcaaccggccgggagatcaaatgcgcgacaaatacaaccttaacacccaaccaaat
ggcattgccggattagaggatatggatctgggagatgagcaaaacaactcgatgatccct
ggaatgggtccagaggacaaagtggaaataaccgcgttgattggcgatgaaaacactgcc
attcctggattggatctggattccggccttttagtcaacgaggagagggccaaacccaag
aaagtgccctttagcaagccaattcccaggaactttcaagctcaatggaacgaagcaacc
agtgttgaaactacccctggagtggtcccattggagaaaatctgccccaacgctattatc
gtctacgggaagcttattccagtggaacctggctccaagttagaaaaggcaatttctgaa
ggcccagaagttctacagcggtacatcgactcgggggctattgaagagcttcaagacgta
atccctatcagggatccagatgaagatgactacttgcgagacacaaatcacgatgagatc
gagaacatgcacaatatgaacagaagcagcaacgacatggacaatcacagtcagtataac
gacgaggatttccggggcatggatcacgatatccggggtttcaatgcgacaggagagtct
gatatcagaccgtttggtggtgacacggacttcaggagccattccgacatggatttccga
tcaaatcatgactttgatcacagaaaaccgcttccgttccgatcaggtcccattcgtcca
atgtctggacgtccaatcacatatggcgtaaatgaaatggacggcccagttggtctggac
agtccaatgggtggaagattgccaccttttggtccgagccctcccatgggaccaggaaga
tcaatggggggcgcaaccggtccggatggacggcgcggactgttggggccccccttgcga
ggcccgagaagtgggttcgatagtttcggcgatgaagattttcggcccaattcgcggtcg
ttggaattcattgaaccgtttgatcgcgacgatgagtacgacgacagcaattatgaagat
gattataataatgaattttacgacgaagaaccgtcgaacaactctaacaattggcagcgg
aatggaggcaacttccaaagtgtgggcttcaatcaaagaagcggcggaagttcgtccaat
gaaaactggaacaatgcaccaagtcagaacttccgacctcatggaggtagaggtgcgaga
ggcgggggaggaggaggaggaggaaattctggaaaaagcagaaaaagtagaaaaagtgga
ataagtggacggggacggagtgcacgaataaccagcgcaggccgacgtagaacacctcgc
ggaggtcgcggccgaggcggttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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