KEGG   Dendroctonus ponderosae (mountain pine beetle): 109542019
Entry
109542019         CDS       T04899                                 
Name
(RefSeq) tetratricopeptide repeat protein 37
  KO
K12600  superkiller protein 3
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109542019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpa03019]
    109542019
Messenger RNA biogenesis [BR:dpa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     109542019
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_14 TPR_8 TPR_17 TPR_19 TPR_16 TPR_11 TPR_12 TPR_6 ANAPC3 TPR_7 TPR_9 TPR_10 TPR_15 TPR_21 Coatomer_WDAD HTH_11 FAT
Other DBs
NCBI-GeneID: 109542019
NCBI-ProteinID: XP_019766605
EnsemblRapid: LOC109542019
Position
Unknown
AA seq 1307 aa
MDIKTLLKQARAALKAKDFAAALKVSKSIVKQDKNSYMGLVFLGLALQEVGPTHQALKAF
QKAIDLDAANPLAWQGLVSYHEKLNSDSSQTELLKLYQAYLAIETNEAKLLEYAKRLSGL
NGQGDALETCKVLLSTANKCSTEARVEIAKLVAHHLESGVETKLLDLYEACLELLLPSAA
VSEGFYSSYITVLNKSRQMLRVLDHSQKMHELFPSSVVALSWICKVFNEMSIEENSEVDS
ITPKIGGFTAKLLNLEPANAMALFTQAVLLFRDRNVFEAREKLLLVTKQRQGLVYAWVLL
TDVLIRLRLSSEALASLARSQKLVRSLTNPVLLHKVRIQHLEILSLSDNVDDWQKCLDIA
AEDVDQNQCLGPLIRASVNLQEFSLAENHISALESLKPEAAHAFKIRLYRKQGKYTAAQQ
LIEEFTCNSTDWWIEVGLLHWEMGQFSKCLDPFLKAAKCDPSNFACFVHLGQYYNRVGHL
DKARRCYEKAFKLNPASPEAGSELSKVYRKLKNWESNLSLLLNLTEGLVDSANVWAWLQL
GLTYLEQGNPVNALEYLRIVIRIDPENTNCWESLGDAYFAKGAFTSALKCYQKALDLSEF
SLYSALQVAYIKKVLGDYVEAQADFEAILTRSNQYVPALKGLSETCLCQARECLKNQRLG
AARDFVQDAVNKVTLAITQRSELTCLWKLLADCVMFVAQLPEKYSCLKLPHLPASGSPQK
SAILEQTELFEWATKFYCKAVSSAEDNPFLWHDLGTCYLQYACNHNDPVKKNELLNNAIS
IAQHCTSLNPEYWQHWNLLGVAAVLREPPNYALAQHSFIKAVIAESNSAVAWTNLGILYL
RMEDLELANKAFGEGQRSDPNYVNCWIGQAIIAEXMXHSDAMGLFRHSTQLQQHQEGSLG
YGHXVCDSLINRKCNDKSWEYNINNMHAIPAAFDNVLWFTEKSPDSSCAWNMLGILAERM
GLLGSAKKAFKHALVLAERAHKDLARTNYGRLLYRTGEYEEAIEMFSHVEAATFSSGAGF
ALALFRNGQYEESYAAYEQALHWLTEEQTSQSELLVALASMAYKFQGADAAKTLLFQSIG
LNPPSPWSLYATFALSLLQKDWKLSQLVLKELVALETSSFGLNHNQPEFIYHYATLLSQF
YLLKNDRKEALAGLSRLVHKYPNIGSTWLSLSQMILRLEVDKGRLQAGANCANIALKLGQ
RHMDASKVQCLAALSFQRAGDWKRAALFAQKAIHLCPDQADGWATLIRPLQSLQAGELCQ
KLPGYFARVECNETIRSWVQKVLSVDLMRPISKATFFVKKAFSASCA
NT seq 3924 nt   +upstreamnt  +downstreamnt
atggacatcaagacgttgttgaagcaggcgagagcagcactgaaagccaaagattttgct
gccgcccttaaagtttccaagtcgatcgtcaagcaagacaagaacagctacatggggctg
gtgtttctagggctagcgctccaagaagttggcccgacgcatcaggcgctgaaggccttt
cagaaggcaatcgatctggacgctgccaatccgttggcttggcaaggcctggtcagctac
catgaaaagctcaacagcgacagctctcaaaccgagttgctcaagttgtaccaggcctat
ttggcaattgaaaccaatgaggccaagcttcttgagtatgctaaaagactgtcagggctg
aacggccagggagatgctctggaaacttgcaaggtgttgttgagtacagccaacaaatgc
tcgactgaggctcgagtggagattgccaaactcgtggcacatcatttggagtcgggggtt
gaaactaaacttctggatctgtatgaagcctgcctggaactgctactgccgtccgccgca
gtgtccgaggggttctactccagctatatcactgtgctgaacaagagtcggcaaatgctt
cgggttttagatcattcgcagaaaatgcatgaactctttccatccagtgtggtcgccctc
agttggatctgcaaagtgttcaatgaaatgtccatcgaggaaaactctgaggtggactca
attacgccaaaaattggcggctttaccgccaaactcctcaatctcgaacctgccaacgct
atggctttattcacgcaagctgttctcctcttcagggaccgcaatgttttcgaagctcga
gaaaagctgctgcttgtaaccaagcaaaggcaggggttggtttatgcctgggtgttactc
acggacgttctgatccggctgcgtttgagcagcgaggctttggcatctctagccagaagc
caaaagctggtgcgttccttaaccaaccctgttttgcttcataaggtccggattcaacat
ctggaaattctgtcgttatcagacaacgtggatgattggcaaaagtgcctggatattgct
gcggaggatgtggatcagaatcagtgcctaggacctctgataagagctagtgtcaatttg
caggagttttccctagcagagaaccacatttccgctctagagtcgcttaaacccgaagcg
gcccacgctttcaagatccgtctgtatagaaaacagggcaaatatacagcagcgcagcag
ctaattgaagaattcacttgcaactccactgactggtggatcgaagtgggcctactccac
tgggaaatggggcaattttccaagtgccttgacccatttttaaaggcagccaaatgcgat
cccagcaatttcgcgtgctttgtccatttgggccaatactacaatagagtgggccacttg
gacaaggcaaggcgctgctatgaaaaggcgttcaaactcaatcccgcctccccggaggcg
ggcagtgaattgagcaaagtttaccgaaagctgaagaattgggagtccaacttgtccttg
ctgctcaatttaaccgagggcttagtggatagcgcaaatgtgtgggcctggctgcaactg
ggtttgacctacttggaacaaggaaatcccgtcaatgctttggagtatctcagaatcgtt
atccgaattgacccggaaaacacaaattgctgggagtctttgggcgacgcctattttgca
aagggcgccttcacctcggccttaaagtgctaccaaaaagccttggacctatcggagttt
tccctctactcggctttgcaagtggcctacatcaaaaaggttttgggcgactatgtggag
gctcaggccgactttgaggccatcctcacgcgcagcaaccagtacgtgcccgcgcttaaa
ggccttagcgaaacttgcctttgccaggcgagagaatgtttgaaaaaccaacgacttggt
gctgctagggattttgtgcaggatgcggtcaataaggtgactttggccataacacaaaga
agcgagctgacttgcctgtggaagctgctggcggactgtgtgatgtttgtggcccaactt
ccagaaaaatactcctgcctcaagttgccccacttgcctgcttcgggcagcccgcagaaa
tcagcgatcctggagcaaaccgagctgtttgaatgggcgacgaagttctactgtaaagcc
gtgagttcagccgaagacaatccgtttctgtggcacgacttgggcacttgctacctgcag
tatgcgtgcaatcacaacgacccagtgaagaagaacgaacttctcaacaacgccattagc
attgcccagcattgcacctccctgaatcctgagtattggcagcattggaaccttctaggc
gtcgcggcggttcttagagagccccccaattacgcgctggcacaacacagctttatcaag
gctgtgatagcggagagcaacagtgctgtcgcttggaccaacttgggaatcctgtacctg
cggatggaggatctggagctggccaataaggctttcggagaaggccagcgatcggatccc
aactacgtcaactgctggattggccaagcgattattgcagaarcgatggrgcatagcgac
gcaatggggctgttcaggcacagcactcagctgcagcagcatcaggaggggagtcttggg
tatgggcattgsgtgtgcgactccttgatcaaccgcaaatgcaacgacaagtcctgggag
tacaacatcaacaacatgcacgccatcccggcggcctttgataatgtsctgtggttcact
gaaaagagtcccgacagcagctgcgcatggaacatgctgggtatcctggccgaaagaatg
gggctgttgggctcggccaagaaggctttcaagcacgccctagtcctggccgagcgcgcc
cataaagaccttgcgcggaccaactacggaagattgctgtatcggactggggaatatgag
gaggcgattgaaatgttctcccatgtggaggcagccacgttcagcagcggggctggattc
gctctggctctattcagaaatggccaatatgaggagtcctacgcggcttacgagcaagcc
ctccattggctcacagaagaacaaacgtcgcagtcggaactgttggtcgctttagcctcc
atggcctataagtttcagggcgccgatgccgccaaaactctcctatttcaaagtatcggc
ttaaacccgccgtcgccttggagtttatatgccacgttcgccctctccctgctccagaag
gactggaagttgagccagctagtcctcaaagagctggtcgctttggaaaccagctccttc
ggactcaaccacaaccagccggagtttatttaccactatgccacgctcttgtcgcagttt
tacctactgaagaacgaccggaaggaggcgctggccggattgagccgtttggttcacaag
tatcccaacataggctccacttggttgagcttatcgcagatgattctgaggctggaagtg
gacaaaggccgactgcaagcaggcgcgaactgcgccaatatcgcactgaaactcggacag
cgccacatggacgcttccaaggtgcagtgcttggcagctctgtccttccaaagggccggc
gactggaaaagagcggcgctcttcgcgcagaaagccatccatttatgtccagaccaggcg
gacggatgggccacgttgattcggccgctccaaagcctgcaggctggggaactctgccaa
aagctgcctggctactttgcccgtgttgaatgcaacgaaactatccgaagttgggtgcag
aaggtgttaagtgttgatctaatgcgtccaattagcaaagcgacatttttcgttaaaaag
gcttttagcgcttcatgtgcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (19)   
   Pfam (19)   
All databases (77)   

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