KEGG   Deinococcus peraridilitoris: Deipe_1268
Entry
Deipe_1268        CDS       T02381                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
dpd  Deinococcus peraridilitoris
Pathway
dpd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Deipe_1268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpd03400]
    Deipe_1268
DNA repair and recombination proteins [BR:dpd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Deipe_1268
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Deipe_1268
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 PVL_ORF50 P-loop_SecA Kinesin
Other DBs
NCBI-ProteinID: AFZ66818
UniProt: K9ZYU2
Position
complement(1284341..1286356)
AA seq 671 aa
MLKVTSEYQPSGDQPQAIKSLVAGLDDGLRFQTLLGATGTGKTYAMAKVIEQTQRPALIM
APNKILTAQLASEFREFFPGAAVEFFVSYYDFYQPEAYVPGRDLFIDKDASINQELERLR
HSTTRSLLTRTDTIVVASVSAIYGLGDPEEYRALNLILKRGDSIGRDAVLDRLIELQYDR
NDVELMPGRFRAKGDVIEIWPSYDEQPLRLELWGDEVDRIVVYQPVTGDVEAELDSTVVY
PAKHYVSSAGNIDRAIITIQQELDERLEYFRSVGKLLEAQRLKERTLYDLEMLKVLGYCS
GIENYSRHVDGRKPGETPYTMLDYFPSNFVTFIDESHVTVPQIGGMSNGDRARKQTLVDY
GFRLPSAMDNRPLTFDEFLGKVGQTVFVSATPGPYEAEHSDNVADQIIRPTGLVDPQVSL
QPIKGQVEDLLGRVRERAARGERVLVTTLTKKMSEDLTEYLLEKGVRARYLHSDIDTVER
QVIIRDLRLGHYDVLVGINLLREGLDLPEVSLVAILDADKPGFLRSERSLIQTIGRAARN
VNGEVILYGDSITPAMKAAMEETERRRNKQLAYNEEHGITPTTIRKGVRDVIRGEEAQEL
PQQTQLADDRESLMRQLTDLELDMWQASEALDFEKAASLRDSIRAIEAKLQGKEISQPTI
PGQKVRKRGRR
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgctcaaggtcacgtccgaataccaaccgagtggcgaccaaccgcaagccatcaagagc
ctcgtggcgggtctggacgacggactgcgcttccagacgctgctgggcgccacgggcacg
ggcaaaacctacgcgatggccaaggtgatcgagcagacgcagcggcctgccctgatcatg
gcgcccaacaagattctgaccgcgcagctcgccagcgagttccgcgaatttttcccgggg
gccgccgtcgagttcttcgtcagctactacgatttttaccagcctgaagcgtacgtgcca
ggccgtgacctcttcatcgacaaggacgccagcatcaaccaggaactcgaacgcctgcgt
cactccaccacccgcagcctgctgacccgcacggataccatcgtggtggcttcggtctcg
gccatctacggcctgggcgaccccgaggagtaccgagcactcaatttgattctcaagcgc
ggcgacagcatcggacgcgacgcggtactcgaccggctgatcgaactgcagtacgaccgc
aacgacgtcgaactgatgcctggccgctttcgcgccaagggtgacgtcatcgagatctgg
cccagttacgacgagcaacccctgcgcctggagctgtggggtgacgaggtcgaccgcatc
gtggtgtaccagcccgtcacgggtgacgtggaagccgaactcgacagcaccgtcgtatat
ccggccaagcactacgtctccagcgccggcaacatcgaccgcgccatcatcacgattcag
caggaactcgacgagcgcctcgagtatttcagatcggtcggcaagctgctcgaagcgcaa
cgcctcaaagagcgcacgctgtacgacctcgagatgctcaaagtgctcggatactgcagt
gggatcgagaattactcgcgtcacgtcgacggccgtaaacccggcgagacgccctacacc
atgctcgactactttccgagcaacttcgtcacctttatcgacgagtcgcacgtcacggtc
ccgcagatcggcggcatgagcaacggcgaccgggcccgcaagcagactttggtcgattac
ggcttccggctgcccagcgccatggacaaccgcccgctcaccttcgacgagtttctgggc
aaagtcggccagaccgtcttcgtaagcgccacccccggcccttacgaggccgagcacagc
gacaacgtcgccgaccagatcatccgcccgactggcctggtcgatcctcaagtcagcctg
cagcccatcaagggacaggtcgaggacctgctgggtcgcgtacgcgaacgcgccgcgcgc
ggagagcgcgtgctggtcaccaccctcaccaagaagatgtccgaggacctcaccgagtac
ctgctggaaaaaggagtacgcgcccgctacctgcacagcgacatcgacacggtcgagcgt
caggtcatcatccgcgatttgcgcctgggacactacgacgtgctggtcggcatcaacctg
ctgcgcgaggggctcgacctgcccgaagtgagcctcgtggcgatcctcgacgccgacaaa
cctggctttttgcgcagcgagcgcagcctgatccagaccatcggtcgtgccgcccgcaac
gtcaacggtgaagtgatcctgtacggtgacagcatcacgcccgccatgaaggccgccatg
gaagaaaccgaacgccgccgcaacaaacagctcgcctacaacgaggagcatggcatcacg
cccaccaccatccgcaagggcgtgcgcgacgtcatccggggcgaggaagcgcaggaactg
ccccagcagacccaactcgccgatgaccgcgaaagcctgatgcgtcagctcaccgacctt
gagctcgacatgtggcaggcgtccgaagcgctcgatttcgagaaagccgcgagcctgcgc
gactcgattcgcgccatcgaggccaaactgcagggcaaggaaatcagccagcccaccatt
cccggacaaaaagtgcgtaaacgcggacgccgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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