KEGG   Dolosigranulum pigrum: FNV33_00640
Entry
FNV33_00640       CDS       T06088                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
dpm  Dolosigranulum pigrum
Brite
KEGG Orthology (KO) [BR:dpm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpm03400]
    FNV33_00640
DNA repair and recombination proteins [BR:dpm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FNV33_00640
    Archaeal homologous recombinant proteins
     FNV33_00640
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N ABC_ATPase CENP-F_leu_zip Prefoldin_2 AAA_21 ABC_tran AAA_16 AAA_22
Other DBs
NCBI-ProteinID: QDO90633
UniProt: A0A516GGI5
Position
126609..129677
AA seq 1022 aa
MRPLKLELQAFGPFRDKMVIDFSSFDQSGLFLISGPTGSGKTTLFDAMAYALYDEASGDV
RERDTLKSQYANDEMLCYVKFTFDVGGKTYTILRKPTQIGPGVRTKTKHIQTEAELAING
TIVATKKTEVDAYIGQILSLTADQFKQIVMIPQGEFRRLLISSSREKEAIFRNIFKTHQL
ETFQMKLKEKADAFRERRRDLTVKLSQVLTDMQQAIDHPPLHEAAEKQQLTVVRTELQRL
IDTGQVEREVVEEKLAKNQEQQSRYEQILQLWVDQAAQLTELQQLDDQAEMIDQLKQQLH
NHREASTLDQLYQPLQETVQSIRQAEQTLTHYQAELAKLKEQQAILDQEQATLQAEIAQL
PTVETEIEQLQAEQRLFKELADVETEQSTLQDSLSEQQATLEDTNQAVDQLTHQIEDKEA
QLKQVKQWRQTLEELQDEQADYKNTKQQAEQTLETLNQLQQLKQQISAISTTLEQKHAHY
RKLDAQASRMEHAYLSNLAGSLAAELVSGEACPVCGSLEHPDRATTHVDTVTKEQKEAAE
LEATQAREAWVATKTKREHLWETFNATLTQVAIEGDDLDQEITQKRQQVEQLDTTLSSLN
QQIDTLRQNIAKEPQWQQDLKDLEHRRQATIETQTRLISSQEHINERLTTLTVKAQQLAQ
QLTDESIDALNQKLADKKEWKQQVTDQQQSLNKRQETLATEQASNKKGIDLTKEHLTQLE
IKHHKQEKAYQQALATSELDDTFRQYLVADQTAKEWEDTINQAQERRAIAKSKLADLQQK
LAQYDADQATDWYKEQLNILSQQASELRANRDQWISRLDSYQRTLTAVINLNQEQQDLRE
NSQIYEELHELASGSKQTHRVSFERYVLSMYFDHIILAANSRLKTMTAGRYVLQRPNTDQ
QKGLAARGLDLNVLDHYTGQNRSVTTLSGGEMFKASLSLALGLSDVIQNELGGVHVDTLF
IDEGFATLDMESLDVAIQILMDLNKTGRLIGIISHVEELKTRIASRINVHKTTQGSQVEV
VV
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgaggccattgaagttagagttgcaagcatttgggccatttcgagataagatggttatt
gacttttcgtctttcgatcagtccggcttattccttatatcaggtccgactggttcgggg
aagacgacgctatttgatgcgatggcttatgcattatatgatgaggcgagcggtgatgtt
cgagagcgtgacacattgaagtcacagtatgccaatgatgagatgctctgttatgtgaag
tttaccttcgatgtgggagggaagacgtatacgattctgcgtaagcctacccaaatcggc
cccggtgtacgaacgaaaacaaaacatattcaaaccgaggcagaactggccatcaatggc
acaattgttgcgacgaaaaagaccgaagtggatgcctatattggacaaattttgagctta
actgctgatcagttcaaacaaattgtaatgattcctcaaggagaatttcggcgattatta
atctcaagtagtcgtgaaaaagaagccatttttcgtaatatctttaagacacatcagtta
gagaccttccagatgaaactgaaggagaaggcagatgcgtttagagaaagacggcgcgat
ctgaccgtgaagttaagccaagtattgacagatatgcaacaagctattgatcatccaccg
ttacatgaagctgctgagaagcaacaattaacggtggtgcggacagaattgcagcggtta
attgataccggacaagttgagcgggaagtggtcgaggagaagctagcgaagaaccaagag
caacaatcccgctatgagcagattttgcaattatgggtagatcaggccgcacaactgacc
gaattgcagcagttggatgatcaagcggagatgattgaccagttaaagcaacagctgcat
aatcaccgcgaagcaagcacacttgatcaactgtaccaaccacttcaagagacagtgcaa
tccatccgccaagcggagcaaacattgacacattatcaagctgaactagcaaaacttaag
gaacagcaagctatccttgatcaggaacaagcgaccttgcaagcagagattgcacaacta
cctaccgttgaaacagagattgaacaattgcaagccgaacaacgattatttaaggaatta
gctgatgtcgaaacagagcagtcaacactgcaagactctttgtcagagcagcaagcgaca
ctagaagacactaaccaagccgttgaccaactaacgcatcaaatcgaagacaaagaagcc
caactcaagcaggtcaaacaatggcgccagaccttagaagagctacaggacgaacaagct
gactataagaacaccaagcaacaagctgaacaaacattagagaccttaaaccagcttcag
caattgaagcaacaaatttctgccattagtacgacgcttgaacaaaaacacgctcattac
cgcaaactagatgcacaagccagtcgcatggaacacgcttatttaagcaatttggccgga
agcttagcggctgaattggtgtcaggcgaagcgtgcccagtctgtggatcgctcgaacat
cccgatcgtgccactacccatgtggacaccgttaccaaggaacaaaaagaagcagctgaa
cttgaggccacgcaagcccgtgaagcatgggtggcgactaagaccaagcgagagcactta
tgggaaacattcaatgctaccttaacgcaggtagcgatcgaaggggatgacttggaccag
gaaataacacagaagcgccagcaagtggagcaactggatacgaccttatcatcgcttaac
caacaaatcgataccttgcgccaaaatattgccaaggaacctcaatggcaacaagacttg
aaggatttagagcaccggcgtcaagctaccatagagacacagacacgattgatcagcagt
caagagcacataaatgagcgtttgacgaccttgacagtcaaagcccagcaactagcgcaa
caattaacggatgaatcgattgatgctcttaatcagaagctagcagacaaaaaagagtgg
aagcagcaagtgaccgatcagcagcagtctctgaacaagcgccaagagaccctagcaaca
gagcaagccagtaataagaaaggaatcgatttaaccaaagaacacctcacccagctggaa
atcaagcatcataaacaagaaaaagcttatcagcaagctttagctactagcgagctagat
gatacgtttagacagtatttagtcgctgaccagacagctaaagaatgggaagataccatt
aatcaagctcaagagcggcgtgccattgctaagagtaaattagctgatctccaacaaaaa
ttagcgcaatatgatgctgaccaagcgacagactggtataaggaacagctaaacatatta
tcacaacaagcttctgagttaagagcaaaccgcgatcaatggattagccgactggacagt
tatcagcgaaccttaacagctgttattaatttaaaccaggaacaacaagatcttagagaa
aatagtcagatctacgaagagttgcatgaactggcttccgggagtaaacagacccatcgt
gtatcattcgagcgttatgtattgagtatgtattttgatcatattatactagctgctaat
agtcgcttgaagacgatgaccgctggacgctacgtgctgcagcgaccgaatacagatcaa
caaaaaggcttggccgcacgaggcttagatctaaatgtgcttgatcattatactggacag
aatcgcagtgtaactaccttatcaggtggcgagatgttcaaggcatcgttatcacttgcg
ttaggactatcggatgttatccagaatgaactaggcggtgtacatgtggatacactcttc
atcgatgaaggatttgctacattagatatggaatcactcgatgtcgccattcagattttg
atggacttgaataagacggggcgtttaattgggattatttctcatgtggaggaattgaag
acccgcattgcttcgcggattaatgtgcataagacaacacaaggcagtcaagttgaagta
gtcgtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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