KEGG   Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_38323
Entry
DICPUDRAFT_38323  CDS       T02090                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
dpp  Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018  RNA degradation
dpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DICPUDRAFT_38323
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DICPUDRAFT_38323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpp03019]
    DICPUDRAFT_38323
   03041 Spliceosome [BR:dpp03041]
    DICPUDRAFT_38323
Messenger RNA biogenesis [BR:dpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     DICPUDRAFT_38323
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     DICPUDRAFT_38323
Spliceosome [BR:dpp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    DICPUDRAFT_38323
SSDB
Motif
Pfam: LSM DUF150_C SM-ATX
Other DBs
NCBI-GeneID: 10508829
NCBI-ProteinID: XP_003290991
JGI: Dicpu1_38323
UniProt: F0ZU89
Position
Unknown
AA seq 98 aa
MASSFNASKKESILDLQRFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTKEFIRDPI
DPLIVTDETRFLGLVVCRGSSVMMVCPTEGFETIDNPY
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcatcatcattcaacgcatcaaaaaaagaatcgattttagatcttcaaagattttta
ggaaaagagatctgtgttaaatttacaggtggtcgtgaggttcaaggtattttaaaagga
tatgatcaattagttaatattacattagatcaaactaaagaatttattagagatccaatt
gatccattaattgttacagatgaaactagatttttaggtttagtagtttgcagaggaagc
agtgttatgatggtttgcccaactgaaggttttgaaacaatcgataatccatattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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