KEGG   Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_54136
Entry
DICPUDRAFT_54136  CDS       T02090                                 
Name
(RefSeq) hypothetical protein
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
Organism
dpp  Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DICPUDRAFT_54136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpp03041]
    DICPUDRAFT_54136
Enzymes [BR:dpp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DICPUDRAFT_54136
Spliceosome [BR:dpp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    DICPUDRAFT_54136
 Complex C
   U5 SnRNP specific factors
    DICPUDRAFT_54136
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 P-loop_SecA DUF2608
Other DBs
NCBI-GeneID: 10503660
NCBI-ProteinID: XP_003286246
JGI: Dicpu1_54136
UniProt: F0ZFQ4
Position
Unknown
AA seq 630 aa
MNVDPVQFFSNGGLKQENRQDKDRDKDHRDRRDRYDDRDYDRHDDRRYDRNDRYDDRDRR
DRYDDRRDRRNDHHDRYDDRDRRVFEPINGKREREEELRDIQYDYLGLKKDESKKKIKGE
KGKFIFDWDASEDTSSDYNELYSKKYDIQPQFGHGTFGGYDRHQLASKKDLPDTHWSKKQ
LRDMTKRDWHIFKEDFNISTKGGVVPNPIRSWQESSLPRQVLDAVRHLGYEKPSPIQMQS
IPVSVSGRDILGIAETGSGKTCAFVIPMCIYISKQPRLTKETEAEGPYAVVMAPTRELVQ
QIEKETRNFAQFYGFRVVSLVGGQPIEEQAYQLGKGCEIVVATPGRLNDCLQKRYLVLNQ
CNYIVLDEADMMINLGFESQVTSVLDAMPSTNLKSENEELAERQETDRERVYRTTILFSA
TMPPQVEQIAKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLVQLIKDGPPPP
IIIFVNKKKHCENIGAVLEECGVSYTILHGGRSQEQREAALDNFKKKNSDVLIATGVASR
GIHVDGVTHVINFDIPNNIEDYTHRIGRTGRAGSSGLATSFISDKDTEIMYDLKNILTAT
NNIVPIELLKNPASSNSSKSKDSNKSVIFK
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaatgttgatcccgttcaatttttttcaaatggtggtttaaaacaagaaaatagacaa
gataaagatagagacaaagatcatagagatagaagagatagatatgatgatagggactac
gatagacatgatgatagaagatatgaccgaaatgatagatatgatgatcgtgacagaaga
gacagatatgacgacagaagagacagaagaaatgaccatcatgatagatatgacgacaga
gatagaagagtttttgaaccaatcaatggtaaaagagaaagagaagaagagttaagggat
attcaatacgactatctgggtttaaaaaaagacgaatcaaaaaagaaaattaaaggtgaa
aaaggtaagtttatatttgactgggatgcatcagaagatacttcatcagattataatgaa
ttatattcaaagaaatatgatattcaacctcaatttggtcacggtacatttggtggatac
gatagacaccaattagcatccaaaaaagatttaccagatactcattggtcaaagaaacaa
ttaagagatatgaccaaaagagattggcacatctttaaagaggatttcaatatttcaact
aaaggtggtgttgttccaaatcctattcgttcatggcaagaatcatcattaccaagacaa
gtattggatgctgttcgtcatctcggttatgaaaaaccatcacccattcaaatgcaatct
attccagttagtgtttcaggtagagatattttaggtattgccgaaactggttcaggtaaa
acatgtgcctttgttatcccaatgtgtatttacatttcaaaacaaccaagattaaccaaa
gaaactgaagcagagggtccatatgctgtcgtaatggctcccactagagagcttgttcag
caaatcgaaaaggaaactcgtaattttgcacagttttatggttttagagttgtatcatta
gtgggtggtcaaccaatcgaagaacaagcatatcaactcggtaaaggttgtgaaattgta
gttgcaacaccaggtcgtttaaatgattgtttacaaaaacgttatttagtattaaatcaa
tgtaactatatcgtattggatgaagctgatatgatgattaatttaggtttcgaaagtcaa
gttaccagtgttttagatgcaatgccctccaccaacttaaagagtgaaaatgaagaactc
gcagaaagacaagaaaccgatagagaaagagtatatcgtaccactattcttttctctgcc
actatgccgccacaagtcgaacaaatcgctaaaaaatatcttagaagaccctgtactatt
actatcggtgaggctggtaaggttgtagatcgtattcgtcaaactgtcatatttgttaaa
tctgaaaacgacaagaaagaacatctcgtacaactcattaaagatggtccaccaccacca
atcatcattttcgtcaataaaaagaaacactgtgaaaatattggtgcagttttagaagaa
tgtggtgtttcctacactatacttcatggtggtcgttctcaagaacagcgtgaggctgct
ttggataatttcaaaaagaagaattcagatgtacttattgctactggtgtagctagtaga
ggtattcatgttgacggtgtaacccatgttatcaattttgatattccaaataatatcgaa
gattatactcatcgtattggtcgtactggtagagctggttcatctggtcttgcaacttct
ttcatatcagataaagataccgaaattatgtatgatcttaaaaatattcttacagcaacc
aataatatagtaccaatagaattacttaaaaatcctgcaagtagtaattctagcaaatcc
aaagattcaaataaatctgttatttttaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system