KEGG   Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_55353
Entry
DICPUDRAFT_55353  CDS       T02090                                 
Name
(RefSeq) hypothetical protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
dpp  Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    DICPUDRAFT_55353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpp03400]
    DICPUDRAFT_55353
DNA repair and recombination proteins [BR:dpp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     DICPUDRAFT_55353
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV PBP1_TM
Other DBs
NCBI-GeneID: 10501765
NCBI-ProteinID: XP_003288330
JGI: Dicpu1_55353
UniProt: F0ZLQ1
Position
Unknown
AA seq 979 aa
MASSAISTPSRSRKQVITFDDDDDEEEDDNNDDEDDSNSSQKKQKGKPFGKKDKKEIEQR
YSFLVDVKDGNGNKKGSPDYDPRTLQIPASCLTKFSPFERQFWDIKSKYYDTVVFFKKGK
FYELYENDADIGHQILHLKMTDRVNMRMVGVPESAFTHWASKLINLGYKVAKVDQMETSI
GMNKRQNEKGGRNKKDSIIQRELTSILTAGTLLDESMISDKTSTYLMAIKEDEYSNKYGV
CFVDVSIGEFFLCSIDDDENRMQFETLLLQMMPKEVVYEKGAISAKTMSIMKRVLATVKP
VMNARLSLEYWDPSETLNRVNDSCGRIPESLKEMKNETLLICSLGGCLSYLSDIKIAQQV
LEQGRFKRFNSLDVGNSLILDGQCLVNLEIFNNSTDGTTEGTLFKLMDRCVTSFGKRLFR
QWICRPLANKERIVDRQRAIEHLRDNPDHLQKVISILTKIPDLERMLARIRAGSSKIADL
ISVLNHFEAIHSKLEEFEKKMEDFEQEQINGNYSGYPNLLRYITTIKESFKVEQDKIIPS
KGLFKEFDECQKKIQQIEQSLEEHLTEQKTYFSCRNIEFKHMGKEIYQIEVPVSALNRAK
LPKNYQLKSKTKAACRYHTPFIIETLPSLLEERDELEVLSKEVSKKIQANFSVYFNHFSK
AVQRLAQLDCLLSLFKVSCQSGIQMCRPIFVSKIPTNNGGFLDVRDMRHPCIYSKAGDDF
IPNDLSLNVENSPPSILVLTGPNMGGKSTLLRQACILVIMAQMGCFVSASSCEMSIVDRI
FTRLGANDNILAGQSTFMVELQETCSVLKYATNRSLVILDELGRGTSTFDGYSIAYSVLN
YITKNLKSLCIFATHYQSLAMEPSIRNEISTGYMTCQVDEEEKRVIFLYKLAKGICQKSY
GLHVAAMAGLPKEIVAKAEKKSEQMEKESVLVSYIHGTIHRSEMVKKIITAFKNKDHSDL
KILSDTLKKLDLNNNIPDQ
NT seq 2940 nt   +upstreamnt  +downstreamnt
atggcttcatcggcgatttcaacaccaagcaggtcaagaaaacaagtgattacatttgat
gacgatgacgatgaagaagaagatgacaacaatgacgacgaagatgacagcaatagctct
caaaagaaacaaaaaggcaaaccatttggcaaaaaagataaaaaagagattgaacaaaga
tattcatttttggttgatgtcaaagatggaaatggtaataaaaagggatctccagactat
gatccaagaactcttcaaatccctgcaagttgtttaactaaattttctccattcgaaaga
caattttgggacatcaaatccaaatattatgatacagtggtattttttaaaaagggtaaa
ttctatgaactatatgagaatgacgcagatattggccatcaaattttacatttaaaaatg
acagatcgtgtaaatatgcgtatggtgggcgttccagaatctgcatttactcattgggca
tcaaaattaattaatttgggttataaagttgctaaagtcgatcaaatggaaacttcaatt
ggtatgaataaaagacaaaatgaaaaaggtggccgtaataaaaaagactcaattatccaa
cgtgaacttacatcaattcttacagccggtactcttttggatgaatctatgatctccgat
aaaacatcaacctatttaatggcaattaaagaagacgaatacagtaacaagtatggtgta
tgctttgtcgatgtttcaattggcgagtttttcctttgctctattgacgatgacgaaaac
cgtatgcagtttgaaacccttttacttcaaatgatgccaaaagaagttgtatatgaaaaa
ggtgcaattagtgctaaaacaatgtcaatcatgaaaagagtattggccacagtcaaacca
gttatgaatgcccgtttatcattggaatactgggatccatctgaaactttaaatcgtgtc
aacgattcatgtggtaggattccggaatcattgaaagaaatgaagaatgaaacactttta
atatgctcattaggtggttgccttagttatttaagtgacattaaaatagctcaacaggtt
ttagaacaaggtcgtttcaaacgtttcaattcattggatgttggaaactctttaatttta
gatggtcaatgcttagtaaatttagaaatctttaataactctaccgatggtaccaccgag
ggtacacttttcaaactaatggatagatgtgttacttcgtttggcaaacgtttatttaga
caatggatttgtagaccattagctaataaagagcgtattgtagatagacaaagagcaata
gaacatcttagagataacccagatcatctccaaaaagttatttcaattctcacaaaaata
ccagaccttgaaagaatgcttgcaagaattcgtgcaggttcatcaaagatcgcagattta
atttcagttttaaatcactttgaagcaattcatagcaaattggaagagtttgaaaaaaaa
atggaagatttcgaacaagaacaaatcaatggtaattattcaggctatcctaatttattg
agatatattacaaccatcaaagaaagttttaaggtcgagcaagataaaataattccatca
aaaggtcttttcaaagagtttgatgaatgtcaaaagaaaattcaacaaatagaacaatca
ttagaagaacatctaacagaacaaaaaacatatttttcatgtcgtaatattgaatttaaa
catatgggtaaagaaatttatcaaatcgaagtgccagtatccgccttaaatcgtgccaaa
cttccaaaaaattaccaactaaaatcaaagaccaaagctgcctgtagatatcatacccca
ttcattatcgaaacactaccaagtcttttagaagagcgtgacgagcttgaagtgctatca
aaagaagtgtcaaagaaaatccaagcaaactttagtgtttattttaatcatttctcaaaa
gctgttcaaagattagcacaattggattgtttattatcattatttaaagttagttgccaa
tcaggaattcaaatgtgtcgtccaatttttgtttcaaagattccaacaaacaatggtggt
ttccttgatgttagagatatgagacacccttgcatctattcgaaagccggggatgacttt
attccaaatgatctttcattaaatgttgaaaactccccaccatcaatcttagttctcaca
ggtccaaatatgggtggtaaaagtaccttattacgtcaagcatgtattttggttattatg
gctcaaatgggttgttttgtctctgcatcaagttgtgaaatgtcaatagtagatcgtatt
ttcactcgtttgggtgccaacgataatattttagctggccagtcaacatttatggtagag
cttcaagaaacttgctcagtactcaaatatgccaccaatcgatcattagttattcttgat
gaactaggaagaggaaccagtacattcgatggctattcaattgcttactctgttttaaat
tatatcactaaaaacttaaaatccctttgtatttttgcaacccattaccagtctctagct
atggagccatcaattcgtaatgaaatctccacaggatatatgacttgtcaagtagacgaa
gaagagaaaagagtaattttcctttacaaattagcaaagggtatttgccaaaaatcatat
ggtttacatgttgctgcaatggctggtttaccaaaagaaattgttgccaaagctgaaaag
aaatctgaacaaatggaaaaagaatcagttttagtctcctatatccacggtacaattcac
agatccgaaatggttaaaaagattattacagctttcaagaataaagaccacagtgattta
aaaattttatcagatactttaaaaaaacttgatttaaataataacatcccagaccaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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