KEGG   Desulfotalea psychrophila: DP0053
Entry
DP0053            CDS       T00192                                 
Name
(GenBank) probable endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
dps  Desulfotalea psychrophila
Pathway
dps03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DP0053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dps03400]
    DP0053
Enzymes [BR:dps01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     DP0053
DNA repair and recombination proteins [BR:dps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     DP0053
SSDB
Motif
Pfam: AP_endonuc_2 PhageMin_Tail
Other DBs
NCBI-ProteinID: CAG34782
UniProt: Q6ASE4
Position
58967..59845
AA seq 292 aa
MKYIGAHVSAAGGVENAPKNAVAIGANAFALFTKNQRQWKAKPLTEESIAAFKENLTEAG
IEARHVLPHDSYLINLGHPEAEALEKSRGAFMDELGRCAQLGLPLLNFHPGSHLKKIDPE
ACLDRIAESINLAHGSVADVITVIENTAGQGTNLGYRFEHLARIIAAVEDKSRVGVCIDT
CHAFAAGYDLRTVEACEKSWAEFDRIVGFKYLRGMHLNDAKSEFFSRVDRHQSLGAGNIG
WEAFRYIMKDDRFDDIPLILETVDTSLWQEEIKKLQQWSVVEWRELEKTKTS
NT seq 879 nt   +upstreamnt  +downstreamnt
atgaaatatatcggtgcccatgtgagtgcggcgggaggggttgaaaatgctccgaaaaat
gcggttgcaataggggccaatgcctttgcccttttcaccaagaaccaacgacaatggaag
gccaagcccttaacggaggagagtattgccgcctttaaagagaatttgacagaggccggg
atagaggccagacatgtcctcccccatgactcctatctgatcaacctggggcatcccgag
gccgaggctctggaaaaatcacggggagcatttatggacgagctggggcgatgcgcccag
cttggactacccctgctcaacttccatcccggcagtcacctaaaaaaaattgatccggag
gcctgtctggatcgtattgccgagagcattaatctggcccatgggtcggtggcagatgtg
ataaccgttattgaaaacacggcgggccaaggaactaatctgggctatcgctttgagcat
ctggccaggataatagcggctgttgaggataagtcgcgggtgggagtctgcattgatacc
tgccacgccttcgccgccggctatgacctgcgcactgtagaggcatgcgagaagagctgg
gctgaatttgaccggatcgtgggctttaaatatctgcggggcatgcatctcaatgatgcc
aagagtgaatttttcagtcgggttgaccggcaccagagtttgggggcgggaaatattggc
tgggaggcatttcgctatattatgaaggatgatcgttttgatgatatccctctcatcctt
gaaactgtggacactagcctctggcaggaagaaattaaaaaactacagcagtggagcgta
gtggaatggcgagaactagaaaaaacaaagacaagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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