KEGG   Desulfotalea psychrophila: DP1152
Entry
DP1152            CDS       T00192                                 
Name
(GenBank) probable DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
dps  Desulfotalea psychrophila
Pathway
dps03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DP1152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dps03021]
    DP1152
   03400 DNA repair and recombination proteins [BR:dps03400]
    DP1152
Enzymes [BR:dps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DP1152
Transcription machinery [BR:dps03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DP1152
DNA repair and recombination proteins [BR:dps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DP1152
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L TPK_catalytic 53-BP1_Tudor
Other DBs
NCBI-ProteinID: CAG35881
UniProt: Q6AP43
Position
1286188..1287219
AA seq 343 aa
MTQEIDEKIPVYRNWHELIRPEKVEIDQSNHSETYGKFICQPLERGFATTIGNSLRRILL
SSIQGAAITTVKIEGALHELTSMKDVKEDVSEIILNLKQVRLKLNCEESQTVRIEKQGPG
PVVAGDIIPSAFVEIMNEDHILCNLTSDMTFCAELTVEWGKGYQPAENQEKDDLTVGQIP
IDAIFTPVKKIQYVVSSARVGQQTDYDKLTYEIETDGSVRPEDALAYSAKILKEQLDIFI
NFDETAVEPEKKAVETEEKQENPYLDKPVEDLELSVRSANCLKNADINFIGDLVQRTDQE
MLKTKNFGRKSLNEIKTLLQDMDLTLGVKLEGWNAPSDAETEE
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgacccaggaaatcgacgaaaaaatacctgtttatcgtaattggcatgagctgatcaga
cccgaaaaagtagaaattgatcagagtaatcattctgaaacctacggtaaatttatctgt
caaccgcttgagcgtggctttgcgacgacaatcggtaactctttgcgaaggatccttctg
tcttctattcagggtgcagctattaccactgtaaagatagagggcgctttgcatgaactt
acatccatgaaggacgttaaagaggatgtaagtgagattattctcaatcttaagcaggtt
cgtttaaagcttaattgcgaagagtctcaaacagtacgtattgaaaaacaaggaccagga
cctgttgttgctggtgatattattccatctgcattcgttgaaatcatgaacgaagatcat
attctctgtaatcttacaagtgatatgaccttttgtgctgagttgactgtcgaatggggt
aaaggatatcaacctgctgaaaatcaagagaaagatgacctcaccgtaggtcagattccc
attgatgcgatctttactcctgtaaagaaaattcagtatgttgtctcttctgcccgtgtt
ggtcaacagactgattatgataagttgacctacgagatagaaacagatggtagcgtacga
cctgaagatgctttggcttactcggcaaagattcttaaggagcagcttgatatttttatt
aactttgatgaaactgcggtcgagcctgaaaagaaagctgttgagaccgaagagaagcag
gaaaatccttatctcgacaagcctgttgaagatcttgaattatctgtacgttctgcaaac
tgtctcaagaatgcggatatcaattttatcggtgatttggtacagagaactgatcaggaa
atgttgaagaccaagaactttggtcgtaaatctcttaacgagattaaaacattgttacaa
gatatggatttgacccttggtgtgaagcttgagggttggaatgctccttctgatgcagag
actgaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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