KEGG   Desulfotalea psychrophila: DP1344
Entry
DP1344            CDS       T00192                                 
Name
(GenBank) related to exodeoxyribonuclease V, beta chain
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
dps  Desulfotalea psychrophila
Pathway
dps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DP1344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dps03400]
    DP1344
Enzymes [BR:dps01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DP1344
DNA repair and recombination proteins [BR:dps03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DP1344
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 PDDEXK_1 UvrD_C_2 Helicase_RecD DEAD
Other DBs
NCBI-ProteinID: CAG36073
UniProt: Q6ANK1
Position
1500778..1504353
AA seq 1191 aa
MSYKAGTPDPIIFDVAKTPMERGVNFIEASAGTGKTYAIGMLVLRAICEQDIGIDRILIV
TFTRAAAEELRSRVRARLVEARDLLQGRHEDASLRAWQEHAVKDEGVARRFISRLQLAIV
NIDRAGIFTIHSFCQRMLSEQALESGQLFRMDLLTSLDDLRLRAAEDFWRIHVYSLSPWS
CSLVMGQWSSPADLLANAFVHLHGDTRIEPEVEDISLLWQNLEGAIARMKEWWLGSGTAL
QEALAEACGEDKFKKAFVADFAGSFRACEKFFLGQAEKFPANLSWLTVAGLKVEINGNKF
RGKKKDEIDPFLNSMGLPEMAATELLELKKQLFIGYRIFFAGELERGVGRQLQEHGSISF
DQLISRLAAGLCGEETHLQTALQARYDLALIDEFQDTDNEQWHIFSKLFASKKHSLYLIG
DPKQAIYKFRGADIYSYFTARTKTDYFYSLDTNYRSHRDLVRGVNGLFAGSDDPFLFKEE
GLLYYPVKSGKSRDVYLVDAEKKPLVPFVYLQLEENDDDKKGKWSSALARTAIRGDIVAE
TLHLLSISEPTSIHKLNRDGQSIYQPLRPQDIAVLVRSNSQAEAYQQAFLQVGVPAIIAG
RKTIFETDESHELLLLLQAIIDHDDLRLLKTAMTISLFACTGDDIMAIWQDEQAVAEWYN
VFLQCYHLWSERGVLTMLYFLVDSKELFANLVQFSQPERRIANFTHLFEVLQQAETAANL
GPRQSLLWLRSALTGKQKNDAFELRLESDEEALQIVTMHSSKGLQYPVVFCPDLYGRSAR
IKNEKNVISCHDGGAVIDFGSEHFSERRERACREELAEDLRLAYVALTRAELRSYTYWAD
ISARGAGVDASLNSALGHLLFAGDDIDYEEQQERLKVLARESGALFQHVSAEPATCSSYG
AERRVKSLATRPHRPRLLATDWQMTSYSALASLGDHAPVVQFDRDALADAPRIAFAELPK
GARFGNAVHDLLEKCAFADLVLHADDLHVQGMMEQKCEEYGLQLDQELFTQLFVQACSTP
LFAGGFSLADLSRSRCLKEMEFYLRLAHINLAEINTILADEPTVQAISAKKMRGYMTGFI
DLVCQHEGKYYVVDYKSNYLGELQSDYSGDSLVQVMAAHNYGLQYYIYSLVLHQHLQTFV
EGYSYEEHFGGVMYLFVRGMDPDIAGSGVFATRPARGLIEALDRLIGGGEE
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgagttataaagcaggaacgcctgatccgattatctttgatgtggccaaaacacccatg
gagagaggggttaattttatagaggccagtgccgggacaggaaagacctatgccattggt
atgctggtcttgcgggccatatgcgagcaggatattggcattgatcgtattcttattgtc
acctttacccgggcggcggccgaggagctgcgttctcgggtgcgggcccgtttggtggag
gcccgtgatcttttgcagggacggcatgaggatgcgagtcttcgtgcctggcaggagcat
gcggtaaaggatgagggtgtggctcgacgctttatctctcgtctgcagctggccattgtc
aatattgaccgggcaggtattttcaccatccacagtttttgtcagcggatgctcagtgag
caggccctggaaagtggtcagctctttaggatggatctgcttaccagtctcgatgacctg
cgtctccgggccgccgaagatttttggcgtattcatgtctactccctgtctccctggtct
tgttctttggtaatgggccagtggtcttctccggcggatctgctcgccaacgcctttgtc
catctccatggcgatacccggatagaaccagaggtggaagatatctctcttctttggcaa
aatctcgaaggagccatcgccaggatgaaggagtggtggctcggttcgggtaccgccctg
caggaggccctggccgaggcctgtggcgaagacaagtttaagaaggcctttgtcgcagac
tttgccggctctttccgggcctgtgaaaagttctttctggggcaggcagaaaaatttccg
gcaaatctctcctggctgaccgtggccgggttgaaggttgagataaacggcaataagttt
cgtggtaagaaaaaggatgagatcgacccctttcttaacagcatgggtctgcccgaaatg
gcggccacggagttactggagctcaagaagcagctctttatcggctaccgtatattcttt
gccggagagctggagcgaggggtagggcggcagctgcaggagcatggctccatctccttt
gatcagcttatttcccgtctcgcagctgggctctgcggtgaggagacccatttgcagacg
gccctgcaagcccgttatgatctggccttgatcgatgagtttcaggatactgataacgag
cagtggcatatcttctccaagctctttgcctcgaaaaagcacagcctctacctcatcggt
gaccccaaacaggccatctataagtttcgtggtgccgatatctattcatattttactgcc
cgaaccaagacggattatttttatagtcttgatacgaactatcgctcccaccgggacctg
gtccggggggtaaatggtctcttcgcgggctccgatgacccctttctctttaaggaggag
ggcctgctctactatccggtcaaatcgggtaagagtagggatgtctacctggttgatgcc
gagaagaagccccttgtcccctttgtctatctacagcttgaggagaatgacgatgataaa
aagggcaagtggagctcggccctggctagaactgccattcgcggggacattgttgcggaa
actctccatcttctctcgatcagcgagcccacctccatccataagctgaacagggatggt
cagtcgatttatcagccccttcgtcctcaggatatagccgttctggtgcgttcaaatagt
caggccgaggcctatcagcaggcctttttgcaggtgggtgttcctgccattattgccggg
cgcaagactatctttgaaaccgatgagagccatgaactcctgctccttctgcaggcaatc
attgaccacgacgacctacgtctgctgaaaacggccatgaccatctccctctttgcctgt
acgggggatgatatcatggcaatctggcaggatgagcaggcggtggcggagtggtataat
gttttcctgcagtgctatcatctttggtccgagcgtggggtgctgaccatgctctatttt
ctggttgatagcaaagagctctttgccaatttggtccagttctctcagccggagagacgt
attgccaactttacccatctctttgaggtcttgcagcaggcggaaactgctgccaatttg
ggtccacgtcagagtcttctctggttgcgctcagctcttacggggaaacaaaaaaacgat
gcctttgaactgcggcttgaaagtgatgaagaggccctgcagattgtgaccatgcacagc
tcaaaggggctgcagtatcccgttgtcttttgccccgatctctacggccgctctgcccgt
attaaaaacgagaagaacgttatctcctgtcatgatggtggcgctgttatcgattttggt
tccgaacatttttctgaacgtcgggagcgggcctgtcgggaggagttggccgaagatctg
cgacttgcctatgttgccctgacccgggccgaacttcgttcttatacctattgggcggat
ataagtgcccggggcgccggggtagatgcctcccttaattcagcccttggccatcttctc
tttgccggtgacgatattgactatgaggaacagcaggagcgtttaaaggtgcttgccaga
gaaagtggcgctctctttcagcacgtttcggcagagcctgccacctgctcttcctatggc
gcagagaggagagtaaagagcctggctacccgtccccaccgcccccgccttttggcaaca
gattggcagatgaccagttattcggccctggcctccctcggcgatcatgcccccgtcgtt
cagtttgacagggatgcgctggcagatgcgccgcgtatcgcctttgccgaactgcccaag
ggcgctcgcttcggtaatgcggtccatgatctcctggagaagtgtgcttttgccgatctt
gtcctacatgccgatgatctccatgttcagggtatgatggagcaaaaatgcgaggagtac
ggtctgcagctcgatcaggagctcttcacccaactctttgtccaggcgtgttccactcct
ctctttgcaggaggtttttccctagccgatttgagccggagccgctgcctgaaggagatg
gagttttacctgcgcctagcccatattaatttggctgagataaacaccatcctcgcagat
gagccgacggtgcaggccatatctgctaaaaagatgaggggctatatgacgggctttata
gatcttgtctgtcagcacgagggcaaatactatgtggtggattataagagtaactatctg
ggcgaactgcagagcgattatagcggtgatagtctggtgcaggtaatggccgctcataat
tatggactgcagtactatatttacagccttgttctgcatcagcatcttcagacctttgtt
gagggatactcctatgaggaacattttggtggggttatgtatctctttgttcgtggcatg
gatccggatattgctggtagtggtgtctttgccaccaggcctgccagagggctcattgag
gcccttgatcgtcttattggcggaggagaagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (39)   

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